RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 FRAT2O75474 233 aaPredicted RBP22.29■■□□□ 1.16
PNKP-206ENST00000595792 FGFR2P21802 821 aa22.29■■□□□ 1.16
PNKP-206ENST00000595792 CAVIN4Q5BKX8 364 aa22.29■■□□□ 1.16
PNKP-206ENST00000595792 DZIP1LQ8IYY4 767 aaKnown RBP22.29■■□□□ 1.16
PNKP-206ENST00000595792 EYA2O00167 538 aa22.28■■□□□ 1.16
PNKP-206ENST00000595792 TM4SF4P48230 202 aa22.28■■□□□ 1.16
PNKP-206ENST00000595792 PUM3Q15397 648 aaKnown RBP22.28■■□□□ 1.16
PNKP-206ENST00000595792 MAP3K11Q16584 847 aa22.28■■□□□ 1.16
PNKP-206ENST00000595792 SIL1Q9H173 461 aa22.28■■□□□ 1.16
PNKP-206ENST00000595792 TCP10L2B9ZVM9 353 aa22.27■■□□□ 1.16
PNKP-206ENST00000595792 PPP1R12BO60237 982 aaPredicted RBP22.27■■□□□ 1.16
PNKP-206ENST00000595792 R3HDMLQ9H3Y0 253 aa22.27■■□□□ 1.16
PNKP-206ENST00000595792 LAMB1P07942 1786 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 CACNB3P54284 484 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 SREBF2Q12772 1141 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 ZNF296Q8WUU4 475 aaPredicted RBP22.26■■□□□ 1.15
PNKP-206ENST00000595792 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
PNKP-206ENST00000595792 CLUAP1Q96AJ1 413 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 SLC10A4Q96EP9 437 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 WNK4Q96J92 1243 aa22.26■■□□□ 1.15
PNKP-206ENST00000595792 PA2G4Q9UQ80 394 aaKnown RBP22.26■■□□□ 1.15
PNKP-206ENST00000595792 USP2O75604 605 aaPredicted RBP22.25■■□□□ 1.15
PNKP-206ENST00000595792 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
PNKP-206ENST00000595792 TMEM39BQ9GZU3 492 aa22.25■■□□□ 1.15
PNKP-206ENST00000595792 ZBED9Q6R2W3 1325 aa22.25■■□□□ 1.15
PNKP-206ENST00000595792 GJA5P36382 358 aa22.24■■□□□ 1.15
PNKP-206ENST00000595792 CTU1Q7Z7A3 348 aaKnown RBP22.24■■□□□ 1.15
PNKP-206ENST00000595792 TEPSINQ96N21 525 aa22.24■■□□□ 1.15
PNKP-206ENST00000595792 SLC5A1P13866 664 aa22.23■■□□□ 1.15
PNKP-206ENST00000595792 TNFAIP1Q13829 316 aa22.23■■□□□ 1.15
PNKP-206ENST00000595792 TBC1D22AQ8WUA7 517 aa22.23■■□□□ 1.15
PNKP-206ENST00000595792 GPR25O00155 361 aa22.22■■□□□ 1.15
PNKP-206ENST00000595792 IPO8O15397 1037 aaKnown RBP22.22■■□□□ 1.15
PNKP-206ENST00000595792 IREB2P48200 963 aaKnown RBP22.22■■□□□ 1.15
PNKP-206ENST00000595792 LPIN2Q92539 896 aa22.22■■□□□ 1.15
PNKP-206ENST00000595792 TEKT1Q969V4 418 aa22.22■■□□□ 1.15
PNKP-206ENST00000595792 IGF2BP3O00425 579 aaKnown RBP eCLIP22.21■■□□□ 1.15
PNKP-206ENST00000595792 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
PNKP-206ENST00000595792 ELP3Q9H9T3 547 aa22.21■■□□□ 1.15
PNKP-206ENST00000595792 COPRSQ9NQ92 184 aa22.21■■□□□ 1.15
PNKP-206ENST00000595792 MANSC4A6NHS7 340 aaPredicted RBP22.2■■□□□ 1.14
PNKP-206ENST00000595792 CIAO1O76071 339 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 ZBTB48P10074 688 aaPredicted RBP22.2■■□□□ 1.14
PNKP-206ENST00000595792 SOX10P56693 466 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 IFNL1Q8IU54 200 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 ANKRD13AQ8IZ07 590 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
PNKP-206ENST00000595792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.2■■□□□ 1.14
PNKP-206ENST00000595792 GNAI3P08754 354 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 RGS19P49795 217 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 HDLBPQ00341 1268 aaKnown RBP22.19■■□□□ 1.14
PNKP-206ENST00000595792 MTX1Q13505 466 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 ZDHHC15Q96MV8 337 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 FBXO3Q9UK99 471 aa22.19■■□□□ 1.14
PNKP-206ENST00000595792 RLBP1P12271 317 aa22.18■■□□□ 1.14
PNKP-206ENST00000595792 TNNI2P48788 182 aa22.18■■□□□ 1.14
PNKP-206ENST00000595792 MLLT1Q03111 559 aaPredicted RBP22.18■■□□□ 1.14
PNKP-206ENST00000595792 APOBEC3HQ6NTF7 200 aaKnown RBP22.18■■□□□ 1.14
PNKP-206ENST00000595792 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
PNKP-206ENST00000595792 OPTNQ96CV9 577 aa22.18■■□□□ 1.14
PNKP-206ENST00000595792 ADORA1P30542 326 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 PHKA1P46020 1223 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 CFHR5Q9BXR6 569 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 CEP126Q9P2H0 1117 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 HPS5Q9UPZ3 1129 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 MYH2Q9UKX2 1941 aa22.17■■□□□ 1.14
PNKP-206ENST00000595792 MAST3O60307 1309 aa22.16■■□□□ 1.14
PNKP-206ENST00000595792 PRDX5P30044 214 aa22.16■■□□□ 1.14
PNKP-206ENST00000595792 VGLL4Q14135 290 aa22.16■■□□□ 1.14
PNKP-206ENST00000595792 DIXDC1Q155Q3 683 aa22.16■■□□□ 1.14
PNKP-206ENST00000595792 HDAC5Q9UQL6 1122 aa22.16■■□□□ 1.14
PNKP-206ENST00000595792 PNMA6EA0A0J9YXQ4 647 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 UNCXA6NJT0 531 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 SRGAP3O43295 1099 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 FKTNO75072 461 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 IL15P40933 162 aaPredicted RBP22.15■■□□□ 1.14
PNKP-206ENST00000595792 NOM1Q5C9Z4 860 aaKnown RBP22.15■■□□□ 1.14
PNKP-206ENST00000595792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.15■■□□□ 1.14
PNKP-206ENST00000595792 WDR66Q8TBY9 1149 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 PTPN18Q99952 460 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 SUGT1Q9Y2Z0 365 aa22.15■■□□□ 1.14
PNKP-206ENST00000595792 ALDH1A1P00352 501 aa22.14■■□□□ 1.13
PNKP-206ENST00000595792 GNAI2P04899 355 aa22.14■■□□□ 1.13
PNKP-206ENST00000595792 INHBEP58166 350 aa22.14■■□□□ 1.13
PNKP-206ENST00000595792 TMOD2Q9NZR1 351 aa22.14■■□□□ 1.13
PNKP-206ENST00000595792 DAGLAQ9Y4D2 1042 aa22.14■■□□□ 1.13
PNKP-206ENST00000595792 HHIPL2Q6UWX4 724 aa22.13■■□□□ 1.13
PNKP-206ENST00000595792 MRIQ9BWK5 157 aa22.13■■□□□ 1.13
PNKP-206ENST00000595792 MYO5AQ9Y4I1 1855 aaKnown RBP22.13■■□□□ 1.13
PNKP-206ENST00000595792 TNRC18O15417 2968 aaPredicted RBP22.13■■□□□ 1.13
PNKP-206ENST00000595792 TIMM10P62072 90 aa22.12■■□□□ 1.13
PNKP-206ENST00000595792 MAP3K9P80192 1104 aa22.12■■□□□ 1.13
PNKP-206ENST00000595792 CRHR2Q13324 411 aa22.12■■□□□ 1.13
PNKP-206ENST00000595792 OTUD5Q96G74 571 aa22.12■■□□□ 1.13
PNKP-206ENST00000595792 HTTP42858 3142 aa22.12■■□□□ 1.13
PNKP-206ENST00000595792 TFCP2Q12800 502 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms