RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PSMC4P43686 418 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 ZNF804AQ7Z570 1209 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 NR2E3Q9Y5X4 410 aa17.62■□□□□ 0.41
SHKBP1-208ENST00000595726 SPDYE5A6NIY4 337 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 IRF6O14896 467 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 GJB1P08034 283 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 CETPP11597 493 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 OSBPP22059 807 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 GRK4P32298 578 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 PRMT2P55345 433 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 TNFAIP1Q13829 316 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 G2E3Q7L622 706 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 SRRDQ9UH36 339 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 TTF2Q9UNY4 1162 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 SNCAIPQ9Y6H5 919 aa17.61■□□□□ 0.41
SHKBP1-208ENST00000595726 MYH3P11055 1940 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 PLIN1O60240 522 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 GNRH1P01148 92 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 CASP7P55210 303 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
SHKBP1-208ENST00000595726 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 CACNB3P54284 484 aa17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 GCKRQ14397 625 aa17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-208ENST00000595726 LAMA2P24043 3122 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 GNAI1P63096 354 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 SNAPC2Q13487 334 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 GRIK5Q16478 980 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 MFSD14BQ5SR56 506 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 ERO1BQ86YB8 467 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 SERPINA10Q9UK55 444 aa17.58■□□□□ 0.4
SHKBP1-208ENST00000595726 VCANP13611 3396 aa17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 EVI5O60447 810 aa17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 FARP2O94887 1054 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 U2AF1L4Q8WU68 220 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 UNC93B1Q9H1C4 597 aa17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 ZCCHC17Q9NP64 241 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-208ENST00000595726 FAM205AQ6ZU69 1335 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 HOXD10P28358 340 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 CRKP46108 304 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 TNNI2P48788 182 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 Q7L0L9 218 aa17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-208ENST00000595726 PDHXO00330 501 aa17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 GYG1P46976 350 aa17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 PRKCZQ05513 592 aa17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 GABRQQ9UN88 632 aa17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
SHKBP1-208ENST00000595726 A0A1W2PPC1 479 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 APAF1O14727 1248 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 SGPL1O95470 568 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 FOXO4P98177 505 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 PPIL2Q13356 520 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 DEFB123Q8N688 67 aa17.54■□□□□ 0.4
SHKBP1-208ENST00000595726 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-208ENST00000595726 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
SHKBP1-208ENST00000595726 UBXN2AP68543 259 aa17.53■□□□□ 0.4
SHKBP1-208ENST00000595726 MIGA2Q7L4E1 593 aa17.53■□□□□ 0.4
SHKBP1-208ENST00000595726 ADGRA2Q96PE1 1338 aa17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 TFRCP02786 760 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 INPP5BP32019 993 aa17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-208ENST00000595726 ELNP15502 786 aa17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 HIBADHP31937 336 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 MOGSQ13724 837 aa17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 ANKRD23Q86SG2 305 aa17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 FAM84BQ96KN1 310 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 EYSQ5T1H1 3165 aa17.51■□□□□ 0.39
SHKBP1-208ENST00000595726 CYP2C8P10632 490 aa17.5■□□□□ 0.39
SHKBP1-208ENST00000595726 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-208ENST00000595726 PPATQ06203 517 aa17.5■□□□□ 0.39
SHKBP1-208ENST00000595726 EPHA10Q5JZY3 1008 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms