RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 WDR66Q8TBY9 1149 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 GBA2Q9HCG7 927 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 DENND2AQ9ULE3 1009 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 LAMB1P07942 1786 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 PDS5AQ29RF7 1337 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
SHKBP1-206ENST00000595523 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 RBM5P52756 815 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 OS9Q13438 667 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 TDRD3Q9H7E2 651 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 ZNF70Q9UC06 446 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-206ENST00000595523 ARID4AP29374 1257 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 HUNKP57058 714 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 MOB2Q70IA6 237 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 DBNDD2Q9BQY9 259 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 DEFB129Q9H1M3 183 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 TLR7Q9NYK1 1049 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
SHKBP1-206ENST00000595523 MYO1BO43795 1136 aa13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 MCAMP43121 646 aa13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 APOBEC3HQ6NTF7 200 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 VEZTQ9HBM0 779 aa13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 DBNLQ9UJU6 430 aaKnown RBP13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 MAST3O60307 1309 aa13.54□□□□□ -0.24
SHKBP1-206ENST00000595523 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 FAM155AB1AL88 458 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 AOC2O75106 756 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 CACNB3P54284 484 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 GRM1Q13255 1194 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 SPATA5Q8NB90 893 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 FZD1Q9UP38 647 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
SHKBP1-206ENST00000595523 HSPA1AP0DMV8 641 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 HSPA1BP0DMV9 641 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 ECE1P42892 770 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 FKBP1BP68106 108 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 RASA3Q14644 834 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 GORABQ5T7V8 394 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 TEPSINQ96N21 525 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-206ENST00000595523 MYH7P12883 1935 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 GAKO14976 1311 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 TCP10L2B9ZVM9 353 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 UBE2Q2LH0YL09 131 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 HMMRO75330 724 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 UQCRFS1P1P0C7P4 283 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 NBPF12Q5TAG4 269 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 RHPN1Q8TCX5 695 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 IL1RAPL2Q9NP60 686 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
SHKBP1-206ENST00000595523 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 APBB1O00213 710 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 NF2P35240 595 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 PRKG1Q13976 671 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 AACSQ86V21 672 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 TMEM39BQ9GZU3 492 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 SNRKQ9NRH2 765 aa13.5□□□□□ -0.25
SHKBP1-206ENST00000595523 SLC10A3P09131 477 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 MAP2K2P36507 400 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 ZNF157P51786 506 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 MECOMQ03112 1051 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
SHKBP1-206ENST00000595523 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms