RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
SCAF1-202ENST00000595242 VGLL4Q14135 290 aa16.24■□□□□ 0.19
SCAF1-202ENST00000595242 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
SCAF1-202ENST00000595242 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-202ENST00000595242 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
SCAF1-202ENST00000595242 KCNJ4P48050 445 aa16.23■□□□□ 0.19
SCAF1-202ENST00000595242 RBM5P52756 815 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCAF1-202ENST00000595242 CCL5P13501 91 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 GRK4P32298 578 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 RAET1EQ8TD07 263 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 CSADQ9Y600 493 aa16.22■□□□□ 0.19
SCAF1-202ENST00000595242 EVI5O60447 810 aa16.21■□□□□ 0.19
SCAF1-202ENST00000595242 CETPP11597 493 aa16.21■□□□□ 0.19
SCAF1-202ENST00000595242 CTGFP29279 349 aa16.21■□□□□ 0.19
SCAF1-202ENST00000595242 CDAN1Q8IWY9 1227 aa16.21■□□□□ 0.19
SCAF1-202ENST00000595242 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
SCAF1-202ENST00000595242 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
SCAF1-202ENST00000595242 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 PSMC4P43686 418 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 TRIM47Q96LD4 638 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 TEPSINQ96N21 525 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
SCAF1-202ENST00000595242 COL25A1Q9BXS0 654 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-202ENST00000595242 VCANP13611 3396 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 SPDYE5A6NIY4 337 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 DDX58O95786 925 aaKnown RBP16.19■□□□□ 0.18
SCAF1-202ENST00000595242 OSBPP22059 807 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 HOXD10P28358 340 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
SCAF1-202ENST00000595242 CHRNDQ07001 517 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 C17orf99Q6UX52 265 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
SCAF1-202ENST00000595242 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
SCAF1-202ENST00000595242 JAG2Q9Y219 1238 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
SCAF1-202ENST00000595242 SNAP23O00161 211 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 FMNL1O95466 1100 aaPredicted RBP16.18■□□□□ 0.18
SCAF1-202ENST00000595242 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 IL1R1P14778 569 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 ITGA6P23229 1130 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
SCAF1-202ENST00000595242 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 CPA4Q9UI42 421 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 IL16Q14005 1332 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 MYPNQ86TC9 1320 aa16.18■□□□□ 0.18
SCAF1-202ENST00000595242 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
SCAF1-202ENST00000595242 IRF6O14896 467 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 UBXN2AP68543 259 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 SNAPC2Q13487 334 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 Q7L0L9 218 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 TMEM39BQ9GZU3 492 aa16.17■□□□□ 0.18
SCAF1-202ENST00000595242 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 TAF5LO75529 589 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 SGPL1O95470 568 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 C15orf52Q6ZUT6 534 aaKnown RBP16.16■□□□□ 0.18
SCAF1-202ENST00000595242 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 SNCAIPQ9Y6H5 919 aa16.16■□□□□ 0.18
SCAF1-202ENST00000595242 TNNI2P48788 182 aa16.15■□□□□ 0.18
SCAF1-202ENST00000595242 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
SCAF1-202ENST00000595242 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
SCAF1-202ENST00000595242 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
SCAF1-202ENST00000595242 PI4KAP2A4QPH2 592 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 BMP8BP34820 402 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 PI4KAP1Q8N8J0 262 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
SCAF1-202ENST00000595242 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.17
SCAF1-202ENST00000595242 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
SCAF1-202ENST00000595242 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
SCAF1-202ENST00000595242 LAMA2P24043 3122 aaKnown RBP16.13■□□□□ 0.17
SCAF1-202ENST00000595242 H7C1W4 665 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
SCAF1-202ENST00000595242 PRKCZQ05513 592 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 PPIL2Q13356 520 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
SCAF1-202ENST00000595242 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 GDF15Q99988 308 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
SCAF1-202ENST00000595242 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms