RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TNNI3KQ59H18 835 aa22.53■■□□□ 1.2
DDX39A-212ENST00000590260 APOBEC3FQ8IUX4 373 aaKnown RBP22.53■■□□□ 1.2
DDX39A-212ENST00000590260 WDR66Q8TBY9 1149 aa22.53■■□□□ 1.2
DDX39A-212ENST00000590260 NEUROD6Q96NK8 337 aa22.53■■□□□ 1.2
DDX39A-212ENST00000590260 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
DDX39A-212ENST00000590260 FPGT-TNNI3KV9GXZ4 949 aa22.53■■□□□ 1.2
DDX39A-212ENST00000590260 SEMA3EO15041 775 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 AOC2O75106 756 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 HUNKP57058 714 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 APOBEC3HQ6NTF7 200 aaKnown RBP22.52■■□□□ 1.2
DDX39A-212ENST00000590260 PI16Q6UXB8 463 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 ZNF70Q9UC06 446 aaPredicted RBP22.52■■□□□ 1.2
DDX39A-212ENST00000590260 DENND2AQ9ULE3 1009 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 EXOC6BQ9Y2D4 811 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 SUGT1Q9Y2Z0 365 aa22.52■■□□□ 1.2
DDX39A-212ENST00000590260 FAM155AB1AL88 458 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 HSPA1AP0DMV8 641 aaKnown RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 HSPA1BP0DMV9 641 aaKnown RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 CDAN1Q8IWY9 1227 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 C2orf69Q8N8R5 385 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 ZIC5Q96T25 663 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 DBNDD2Q9BQY9 259 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 MRIQ9BWK5 157 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 DEFB129Q9H1M3 183 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 GNL3LQ9NVN8 582 aaKnown RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 TLR7Q9NYK1 1049 aaKnown RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 HMG20BQ9P0W2 317 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 FZD1Q9UP38 647 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 PDS5AQ29RF7 1337 aaKnown RBP22.51■■□□□ 1.19
DDX39A-212ENST00000590260 AKAP11Q9UKA4 1901 aa22.51■■□□□ 1.19
DDX39A-212ENST00000590260 ARID4AP29374 1257 aaPredicted RBP22.5■■□□□ 1.19
DDX39A-212ENST00000590260 DIXDC1Q155Q3 683 aa22.5■■□□□ 1.19
DDX39A-212ENST00000590260 ZNF384Q8TF68 577 aa22.5■■□□□ 1.19
DDX39A-212ENST00000590260 EAF2Q96CJ1 260 aaPredicted RBP22.5■■□□□ 1.19
DDX39A-212ENST00000590260 ZDHHC15Q96MV8 337 aa22.5■■□□□ 1.19
DDX39A-212ENST00000590260 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
DDX39A-212ENST00000590260 TEKT1Q969V4 418 aa22.49■■□□□ 1.19
DDX39A-212ENST00000590260 VEZTQ9HBM0 779 aa22.49■■□□□ 1.19
DDX39A-212ENST00000590260 MCAMP43121 646 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 CACNB3P54284 484 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 RRP1P56182 461 aaKnown RBP22.48■■□□□ 1.19
DDX39A-212ENST00000590260 GRM1Q13255 1194 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 OS9Q13438 667 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-212ENST00000590260 HHIPL2Q6UWX4 724 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 PAXIP1Q6ZW49 1069 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-212ENST00000590260 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-212ENST00000590260 TEPSINQ96N21 525 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 DBNLQ9UJU6 430 aaKnown RBP22.48■■□□□ 1.19
DDX39A-212ENST00000590260 DAGLAQ9Y4D2 1042 aa22.48■■□□□ 1.19
DDX39A-212ENST00000590260 MYO1BO43795 1136 aa22.47■■□□□ 1.19
DDX39A-212ENST00000590260 RASA3Q14644 834 aa22.47■■□□□ 1.19
DDX39A-212ENST00000590260 NBPF12Q5TAG4 269 aaPredicted RBP22.47■■□□□ 1.19
DDX39A-212ENST00000590260 RGMBQ6NW40 437 aa22.47■■□□□ 1.19
DDX39A-212ENST00000590260 WBP1LQ9NX94 342 aa22.47■■□□□ 1.19
DDX39A-212ENST00000590260 UBE2Q2LH0YL09 131 aa22.46■■□□□ 1.19
DDX39A-212ENST00000590260 ECE1P42892 770 aa22.46■■□□□ 1.19
DDX39A-212ENST00000590260 CCDC8Q9H0W5 538 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-212ENST00000590260 PPP2R3BQ9Y5P8 575 aa22.46■■□□□ 1.19
DDX39A-212ENST00000590260 MAST3O60307 1309 aa22.46■■□□□ 1.19
DDX39A-212ENST00000590260 MYH2Q9UKX2 1941 aa22.45■■□□□ 1.18
DDX39A-212ENST00000590260 TCP10L2B9ZVM9 353 aa22.45■■□□□ 1.18
DDX39A-212ENST00000590260 LDHBP07195 334 aaKnown RBP22.45■■□□□ 1.18
DDX39A-212ENST00000590260 FKBP1BP68106 108 aa22.45■■□□□ 1.18
DDX39A-212ENST00000590260 TBC1D9Q6ZT07 1266 aa22.45■■□□□ 1.18
DDX39A-212ENST00000590260 SPATA5Q8NB90 893 aa22.45■■□□□ 1.18
DDX39A-212ENST00000590260 MYO5AQ9Y4I1 1855 aaKnown RBP22.45■■□□□ 1.18
DDX39A-212ENST00000590260 FOXN1O15353 648 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 PRKG1Q13976 671 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 RASAL3Q86YV0 1011 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 RHPN1Q8TCX5 695 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 TMEM39BQ9GZU3 492 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 OTOFQ9HC10 1997 aa22.44■■□□□ 1.18
DDX39A-212ENST00000590260 GAKO14976 1311 aa22.43■■□□□ 1.18
DDX39A-212ENST00000590260 SLC10A3P09131 477 aa22.43■■□□□ 1.18
DDX39A-212ENST00000590260 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
DDX39A-212ENST00000590260 IL1RAPL2Q9NP60 686 aa22.43■■□□□ 1.18
DDX39A-212ENST00000590260 ABCF2Q9UG63 623 aa22.43■■□□□ 1.18
DDX39A-212ENST00000590260 MAP2K2P36507 400 aa22.42■■□□□ 1.18
DDX39A-212ENST00000590260 ZNF157P51786 506 aaPredicted RBP22.42■■□□□ 1.18
DDX39A-212ENST00000590260 MAP3K11Q16584 847 aa22.42■■□□□ 1.18
DDX39A-212ENST00000590260 LDLRAD1Q5T700 205 aa22.42■■□□□ 1.18
DDX39A-212ENST00000590260 CDC42EP5Q6NZY7 148 aa22.42■■□□□ 1.18
DDX39A-212ENST00000590260 ZNF512BQ96KM6 892 aaPredicted RBP22.42■■□□□ 1.18
DDX39A-212ENST00000590260 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
DDX39A-212ENST00000590260 UQCRFS1P1P0C7P4 283 aa22.41■■□□□ 1.18
DDX39A-212ENST00000590260 MECOMQ03112 1051 aa22.41■■□□□ 1.18
DDX39A-212ENST00000590260 MAST2Q6P0Q8 1798 aa22.4■■□□□ 1.18
DDX39A-212ENST00000590260 RFX7Q2KHR2 1363 aa22.4■■□□□ 1.18
DDX39A-212ENST00000590260 USP2O75604 605 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 CYP2E1P05181 493 aaPredicted RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 NFIAQ12857 509 aa22.4■■□□□ 1.18
DDX39A-212ENST00000590260 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
DDX39A-212ENST00000590260 ZGPATQ8N5A5 531 aaKnown RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 NSUN4Q96CB9 384 aaKnown RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 CHMP4BQ9H444 224 aaKnown RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 ANGEL1Q9UNK9 670 aaKnown RBP22.4■■□□□ 1.18
DDX39A-212ENST00000590260 APBB1O00213 710 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 HMMRO75330 724 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 NF2P35240 595 aa22.39■■□□□ 1.17
DDX39A-212ENST00000590260 NOGQ13253 232 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms