RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.23
VMP1-210ENST00000589823 GRIK5Q16478 980 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
VMP1-210ENST00000589823 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 MICALL2Q8IY33 904 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 L3MBTL3Q96JM7 780 aaPredicted RBP16.51■□□□□ 0.23
VMP1-210ENST00000589823 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
VMP1-210ENST00000589823 GPRC5DQ9NZD1 345 aa16.51■□□□□ 0.23
VMP1-210ENST00000589823 CNOT7Q9UIV1 285 aaKnown RBP16.51■□□□□ 0.23
VMP1-210ENST00000589823 SCNN1DP51172 638 aa16.5■□□□□ 0.23
VMP1-210ENST00000589823 GSTO1P78417 241 aa16.5■□□□□ 0.23
VMP1-210ENST00000589823 ZSCAN25Q6NSZ9 544 aa16.5■□□□□ 0.23
VMP1-210ENST00000589823 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
VMP1-210ENST00000589823 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 LDHCP07864 332 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
VMP1-210ENST00000589823 RBM5P52756 815 aaKnown RBP eCLIP16.49■□□□□ 0.23
VMP1-210ENST00000589823 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
VMP1-210ENST00000589823 MECOMQ03112 1051 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
VMP1-210ENST00000589823 TMED8Q6PL24 325 aaPredicted RBP16.49■□□□□ 0.23
VMP1-210ENST00000589823 TEKT1Q969V4 418 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
VMP1-210ENST00000589823 HACL1Q9UJ83 578 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
VMP1-210ENST00000589823 EPS15P42566 896 aa16.48■□□□□ 0.23
VMP1-210ENST00000589823 ZNF280AP59817 542 aaPredicted RBP16.48■□□□□ 0.23
VMP1-210ENST00000589823 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
VMP1-210ENST00000589823 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
VMP1-210ENST00000589823 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
VMP1-210ENST00000589823 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
VMP1-210ENST00000589823 MYOZ2Q9NPC6 264 aa16.48■□□□□ 0.23
VMP1-210ENST00000589823 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
VMP1-210ENST00000589823 SDSP20132 328 aa16.47■□□□□ 0.23
VMP1-210ENST00000589823 CRKP46108 304 aa16.47■□□□□ 0.23
VMP1-210ENST00000589823 DLGAP5Q15398 846 aa16.47■□□□□ 0.23
VMP1-210ENST00000589823 DIXDC1Q155Q3 683 aa16.47■□□□□ 0.23
VMP1-210ENST00000589823 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
VMP1-210ENST00000589823 ADARB2Q9NS39 739 aaKnown RBP16.47■□□□□ 0.23
VMP1-210ENST00000589823 WDR90Q96KV7 1748 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 PDE6AP16499 860 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 CYP7A1P22680 504 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 YY1P25490 414 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 ADD2P35612 726 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 TBC1D10BQ4KMP7 808 aaPredicted RBP16.46■□□□□ 0.23
VMP1-210ENST00000589823 BMP2KLQ5H9B9 411 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 RBM26Q5T8P6 1007 aaKnown RBP16.46■□□□□ 0.23
VMP1-210ENST00000589823 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 NOL10Q9BSC4 688 aaKnown RBP16.46■□□□□ 0.23
VMP1-210ENST00000589823 RRAGCQ9HB90 399 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 DOCK2Q92608 1830 aa16.46■□□□□ 0.23
VMP1-210ENST00000589823 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.22
VMP1-210ENST00000589823 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 RNF113AO15541 343 aaKnown RBP16.45■□□□□ 0.22
VMP1-210ENST00000589823 VEGFAP15692 232 aaPredicted RBP16.45■□□□□ 0.22
VMP1-210ENST00000589823 EPHX2P34913 555 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
VMP1-210ENST00000589823 ZDHHC15Q96MV8 337 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
VMP1-210ENST00000589823 HIP1O00291 1037 aa16.44■□□□□ 0.22
VMP1-210ENST00000589823 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
VMP1-210ENST00000589823 USP50Q70EL3 339 aaPredicted RBP16.44■□□□□ 0.22
VMP1-210ENST00000589823 TAF1DQ9H5J8 278 aaPredicted RBP16.44■□□□□ 0.22
VMP1-210ENST00000589823 DAGLAQ9Y4D2 1042 aa16.44■□□□□ 0.22
VMP1-210ENST00000589823 GAKO14976 1311 aa16.44■□□□□ 0.22
VMP1-210ENST00000589823 SCN4AP35499 1836 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 POTECB2RU33 542 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 MYO1BO43795 1136 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 BAG3O95817 575 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 BTDP43251 543 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 PNMA8AQ86V59 439 aaPredicted RBP16.43■□□□□ 0.22
VMP1-210ENST00000589823 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
VMP1-210ENST00000589823 NMRK2Q9NPI5 230 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 DIAPH3Q9NSV4 1193 aa16.43■□□□□ 0.22
VMP1-210ENST00000589823 MYO5AQ9Y4I1 1855 aaKnown RBP16.43■□□□□ 0.22
VMP1-210ENST00000589823 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
VMP1-210ENST00000589823 EGFRP00533 1210 aa16.42■□□□□ 0.22
VMP1-210ENST00000589823 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
VMP1-210ENST00000589823 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
VMP1-210ENST00000589823 APPBP2Q92624 585 aa16.42■□□□□ 0.22
VMP1-210ENST00000589823 PRMT6Q96LA8 375 aaPredicted RBP16.42■□□□□ 0.22
VMP1-210ENST00000589823 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
VMP1-210ENST00000589823 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
VMP1-210ENST00000589823 WNT10BO00744 389 aa16.41■□□□□ 0.22
VMP1-210ENST00000589823 PLCG2P16885 1265 aa16.41■□□□□ 0.22
VMP1-210ENST00000589823 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
VMP1-210ENST00000589823 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms