RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 MCM2P49736 904 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 DNTTIP2Q5QJE6 756 aaKnown RBP12.07□□□□□ -0.48
RFFL-212ENST00000584655 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
RFFL-212ENST00000584655 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 TTC14Q96N46 770 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 DCCP43146 1447 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 UTYO14607 1347 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 SERPINB2P05120 415 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
RFFL-212ENST00000584655 DACT1Q9NYF0 836 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
RFFL-212ENST00000584655 USP17L8P0C7I0 530 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
RFFL-212ENST00000584655 ANAPC15P60006 121 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 MFSD6Q6ZSS7 791 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
RFFL-212ENST00000584655 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
RFFL-212ENST00000584655 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
RFFL-212ENST00000584655 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 ERICH2A1L162 156 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 BRD1O95696 1058 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 NCOA7Q8NI08 942 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
RFFL-212ENST00000584655 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
RFFL-212ENST00000584655 MMP10P09238 476 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 METAP2P50579 478 aaKnown RBP eCLIP12.05□□□□□ -0.48
RFFL-212ENST00000584655 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 NEDD4P46934 1319 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 A0A1B0GVL5 298 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 CSF1RP07333 972 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 L1TD1Q5T7N2 865 aaKnown RBP12.05□□□□□ -0.48
RFFL-212ENST00000584655 TTC6Q86TZ1 520 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 MCM5P33992 734 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 VPS72Q15906 364 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 PLIN2Q99541 437 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
RFFL-212ENST00000584655 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
RFFL-212ENST00000584655 COBLO75128 1261 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 RXRBP28702 533 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 KRT85P78386 507 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 STK38Q15208 465 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 STAMQ92783 540 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 ADD2P35612 726 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
RFFL-212ENST00000584655 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
RFFL-212ENST00000584655 NACAP1Q9BZK3 213 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
RFFL-212ENST00000584655 ERBB4Q15303 1308 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 PDIA3P30101 505 aaKnown RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 AOX1Q06278 1338 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 LRRFIP1Q32MZ4 808 aaKnown RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 PARP10Q53GL7 1025 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 CTNNA3Q9UI47 895 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 PCDHAC2Q9Y5I4 1007 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 RPS6KA4O75676 772 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 KRT32Q14532 448 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
RFFL-212ENST00000584655 TMX4Q9H1E5 349 aaPredicted RBP12.03□□□□□ -0.48
RFFL-212ENST00000584655 ALG1Q9BT22 464 aa12.02□□□□□ -0.48
RFFL-212ENST00000584655 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 MECOMQ03112 1051 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.49
RFFL-212ENST00000584655 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 FAM170AA1A519 330 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 ERVV-1B6SEH8 477 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 ZBTB43O43298 467 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 USP28Q96RU2 1077 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 STRBPQ96SI9 672 aaKnown RBP12.02□□□□□ -0.49
RFFL-212ENST00000584655 HELLSQ9NRZ9 838 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 NARFQ9UHQ1 456 aa12.02□□□□□ -0.49
RFFL-212ENST00000584655 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 UQCRFS1P1P0C7P4 283 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 CDC27P30260 824 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 TRIM29Q14134 588 aa12.01□□□□□ -0.49
RFFL-212ENST00000584655 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms