RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CDCA5Q96FF9 252 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 GGA3Q9NZ52 723 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 CHPF2Q9P2E5 772 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 DBF4Q9UBU7 674 aaPredicted RBP6.94□□□□□ -1.3
VAPA-207ENST00000583879 ASTN2O75129 1339 aaPredicted RBP6.94□□□□□ -1.3
VAPA-207ENST00000583879 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 HOXB7P09629 217 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 PKN2Q16513 984 aaKnown RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 HDGFL1Q5TGJ6 251 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 ANGEL2Q5VTE6 544 aaKnown RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 RSBN1LQ6PCB5 846 aaPredicted RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 ZBTB38Q8NAP3 1195 aaPredicted RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 HYPKQ9NX55 129 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 GGA1Q9UJY5 639 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 LAS1LQ9Y4W2 734 aaKnown RBP6.93□□□□□ -1.3
VAPA-207ENST00000583879 TRPM7Q96QT4 1865 aa6.93□□□□□ -1.3
VAPA-207ENST00000583879 LAMB4A4D0S4 1761 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 KDM3BQ7LBC6 1761 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 DGAT1O75907 488 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 UFL1O94874 794 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
VAPA-207ENST00000583879 TM4SF4P48230 202 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
VAPA-207ENST00000583879 TRIM67Q6ZTA4 783 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 RASAL3Q86YV0 1011 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 GMLQ99445 158 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 MYOZ2Q9NPC6 264 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
VAPA-207ENST00000583879 HDAC9Q9UKV0 1011 aa6.92□□□□□ -1.3
VAPA-207ENST00000583879 DUOX1Q9NRD9 1551 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 UBE2Q2LH0YL09 131 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 TBC1D8O95759 1140 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 RALBP1Q15311 655 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
VAPA-207ENST00000583879 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 SPRYD7Q5W111 196 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 MOB2Q70IA6 237 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 RIC3Q7Z5B4 369 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 KCNV2Q8TDN2 545 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
VAPA-207ENST00000583879 PITPNM2Q9BZ72 1349 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 CASP8AP2Q9UKL3 1982 aa6.91□□□□□ -1.3
VAPA-207ENST00000583879 GPR25O00155 361 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 PDE8AO60658 829 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 PCCAP05165 728 aaPredicted RBP6.9□□□□□ -1.3
VAPA-207ENST00000583879 ATP2B4P23634 1241 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 CCDC152Q4G0S7 254 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 PRAMEF18Q5VWM3 479 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 BLOC1S3Q6QNY0 202 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
VAPA-207ENST00000583879 ANKRD18AQ8IVF6 992 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 CCDC146Q8IYE0 955 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 CCDC191Q8NCU4 936 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 RUNDC1Q96C34 613 aa6.9□□□□□ -1.3
VAPA-207ENST00000583879 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
VAPA-207ENST00000583879 SCAF8Q9UPN6 1271 aaKnown RBP6.9□□□□□ -1.3
VAPA-207ENST00000583879 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
VAPA-207ENST00000583879 WNT10BO00744 389 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 MMP14P50281 582 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 PRR20EP86478 221 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 PRR20CP86479 221 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 PRR20DP86480 221 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 PRR20BP86481 221 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 PRR20AP86496 221 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 TTLL12Q14166 644 aaPredicted RBP6.89□□□□□ -1.31
VAPA-207ENST00000583879 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
VAPA-207ENST00000583879 OGFOD1Q8N543 542 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 JARID2Q92833 1246 aaPredicted RBP6.89□□□□□ -1.31
VAPA-207ENST00000583879 CCDC85AQ96PX6 553 aaPredicted RBP6.89□□□□□ -1.31
VAPA-207ENST00000583879 MYD88Q99836 296 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 XDHP47989 1333 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 ZNF609O15014 1411 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 ANKRD36CQ5JPF3 1778 aa6.89□□□□□ -1.31
VAPA-207ENST00000583879 ELL2O00472 640 aaPredicted RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 NF2P35240 595 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 SREBF2Q12772 1141 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 DACT2Q5SW24 774 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 EMID1Q96A84 441 aaPredicted RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 METTL22Q9BUU2 404 aaPredicted RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 MBIPQ9NS73 344 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 CWC25Q9NXE8 425 aaPredicted RBP6.88□□□□□ -1.31
VAPA-207ENST00000583879 MINPP1Q9UNW1 487 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
VAPA-207ENST00000583879 DLG5Q8TDM6 1919 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms