RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 EYA2O00167 538 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 TAF5LO75529 589 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 KRT40Q6A162 431 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 MCM7P33993 719 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 DPCR1Q3MIW9 517 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 MYSM1Q5VVJ2 828 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 DIS3L2Q8IYB7 885 aaKnown RBP20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 ELP1O95163 1332 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
ATPAF1-214ENST00000576409 UBXN1Q04323 297 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 DBNLQ9UJU6 430 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 TMCO5BA8MYB1 307 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 ZAP70P43403 619 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 NOP2P46087 812 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 PSMB7Q99436 277 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 PFKFB1P16118 471 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 MNAT1P51948 309 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 IFIT1BQ5T764 474 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 DZIP1Q86YF9 867 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 PI4K2BQ8TCG2 481 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 FANCLQ9NW38 375 aa20.36■□□□□ 0.85
ATPAF1-214ENST00000576409 MBD4O95243 580 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 STAT6P42226 847 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 XAGE2Q96GT9 111 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 MMRN2Q9H8L6 949 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 AKR1B15C9JRZ8 316 aaPredicted RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 COBLO75128 1261 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 TCERG1LQ5VWI1 586 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 MAATS1Q7Z4T9 603 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 NAA16Q6N069 864 aaPredicted RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 LLPHQ9BRT6 129 aaKnown RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 TCP11L1Q9NUJ3 509 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 NEURL1BA8MQ27 555 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 ZEB2O60315 1214 aa20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
ATPAF1-214ENST00000576409 OAS2P29728 719 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 GABPB1Q06547 395 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 MACROD2A1Z1Q3 448 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 NLRP12P59046 1061 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 PLEKHA4Q9H4M7 779 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 SEC31AO94979 1220 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 ATP5JP18859 108 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 LTKP29376 864 aa20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 ETF1P62495 437 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-214ENST00000576409 CHMP4BP1P59074 171 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 ZSCAN29Q8IWY8 852 aaPredicted RBP20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 MICALL1Q8N3F8 863 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 IL25Q9H293 177 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 POTEB2H3BUK9 544 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 DMTNQ08495 405 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 ADALQ6DHV7 355 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 ESR2Q92731 530 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 GOPCQ9HD26 462 aa20.33■□□□□ 0.85
ATPAF1-214ENST00000576409 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 HSPD1P10809 573 aaKnown RBP20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 ARMT1Q9H993 441 aa20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 METP08581 1390 aa20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 SSH2Q76I76 1423 aa20.33■□□□□ 0.84
ATPAF1-214ENST00000576409 RNASE9P60153 205 aaKnown RBP20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 CCDC40Q4G0X9 1142 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 FAM170AA1A519 330 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 SYCP1Q15431 976 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 CEP112Q8N8E3 955 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 ERLIN2O94905 339 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 TDRD7Q8NHU6 1098 aaKnown RBP20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 KRT23Q9C075 422 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
ATPAF1-214ENST00000576409 MPHOSPH10O00566 681 aaKnown RBP20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 FBXO3Q9UK99 471 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 CCDC122Q5T0U0 273 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 ATRIPQ8WXE1 791 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 SLF1Q9BQI6 1058 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 ASIC1P78348 528 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 PLEKHG3A1L390 1219 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 SASH1O94885 1247 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 MRFAP1L1Q96HT8 127 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 ANKIB1Q9P2G1 1089 aa20.31■□□□□ 0.84
ATPAF1-214ENST00000576409 IFFO1Q0D2I5 559 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 ATL3Q6DD88 541 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 CTAGE1Q96RT6 745 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 LUC7L2Q9Y383 392 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 CTDP1Q9Y5B0 961 aaPredicted RBP20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 TRPM2O94759 1503 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 ARHGAP6O43182 974 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms