RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 ZCCHC17Q9NP64 241 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 CSADQ9Y600 493 aa13.44□□□□□ -0.26
CTDNEP1-202ENST00000570380 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 CETPP11597 493 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 PSMC4P43686 418 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 KSR2Q6VAB6 950 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 HELBQ8NG08 1087 aaPredicted RBP13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 TMEM39BQ9GZU3 492 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 RNF208Q9H0X6 261 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
CTDNEP1-202ENST00000570380 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 CSF1RP07333 972 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 OSBPP22059 807 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
CTDNEP1-202ENST00000570380 IRF6O14896 467 aa13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 HOXD10P28358 340 aa13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 ZNF804AQ7Z570 1209 aa13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-202ENST00000570380 MYPNQ86TC9 1320 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 EVI5O60447 810 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 SGPL1O95470 568 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 CASP7P55210 303 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 SNAPC2Q13487 334 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 SERPINA10Q9UK55 444 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 TTF2Q9UNY4 1162 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 DOCK3Q8IZD9 2030 aa13.4□□□□□ -0.26
CTDNEP1-202ENST00000570380 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 UBXN2AP68543 259 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 PPIL2Q13356 520 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 MFSD14BQ5SR56 506 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-202ENST00000570380 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 CRKP46108 304 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 TNNI2P48788 182 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 PRKCZQ05513 592 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 GCKRQ14397 625 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 Q7L0L9 218 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 STXBP5LQ9Y2K9 1186 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 AK9Q5TCS8 1911 aa13.38□□□□□ -0.27
CTDNEP1-202ENST00000570380 PDHXO00330 501 aa13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 GNAI1P63096 354 aa13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 GDF15Q99988 308 aa13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
CTDNEP1-202ENST00000570380 VCANP13611 3396 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 BMP8BP34820 402 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 CACNB3P54284 484 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 G2E3Q7L622 706 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 ANKRD23Q86SG2 305 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 MTMR10Q9NXD2 777 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
CTDNEP1-202ENST00000570380 PLIN1O60240 522 aa13.35□□□□□ -0.27
CTDNEP1-202ENST00000570380 PPATQ06203 517 aa13.35□□□□□ -0.27
CTDNEP1-202ENST00000570380 RALBP1Q15311 655 aa13.35□□□□□ -0.27
CTDNEP1-202ENST00000570380 GRIK5Q16478 980 aa13.35□□□□□ -0.27
CTDNEP1-202ENST00000570380 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
CTDNEP1-202ENST00000570380 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 BCRP11274 1271 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 GYG1P46976 350 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 FCGRTP55899 365 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 FOXO4P98177 505 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 MOGSQ13724 837 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 PAWRQ96IZ0 340 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
CTDNEP1-202ENST00000570380 ADCY3O60266 1144 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 INHAP05111 366 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 ELNP15502 786 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 INPP5BP32019 993 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 BCAMP50895 628 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms