RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 CAVIN4Q5BKX8 364 aa12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 C15orf52Q6ZUT6 534 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 EYA2O00167 538 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 PDE8BO95263 885 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 SLC5A1P13866 664 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 TRIM27P14373 513 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 NF2P35240 595 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 CTCFP49711 727 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 LBX1P52954 281 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 MAP2K1Q02750 393 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 RGMBQ6NW40 437 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 PITPNM2Q9BZ72 1349 aa12.6□□□□□ -0.39
GTF3C1-206ENST00000566779 MYH2Q9UKX2 1941 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 MYO1BO43795 1136 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 BCAMP50895 628 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
GTF3C1-206ENST00000566779 UBE2Q2LH0YL09 131 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 GNAI3P08754 354 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 PTPN12Q05209 780 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 VGLL2Q8N8G2 317 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 AOX1Q06278 1338 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 ZBED9Q6R2W3 1325 aa12.58□□□□□ -0.4
GTF3C1-206ENST00000566779 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
GTF3C1-206ENST00000566779 PCNTO95613 3336 aa12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 NOGQ13253 232 aa12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 GRIK5Q16478 980 aa12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 HHIPL1Q96JK4 782 aa12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 PRMT6Q96LA8 375 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 ANGEL1Q9UNK9 670 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-206ENST00000566779 MAP3K13O43283 966 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 GNAI2P04899 355 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 MAP2K2P36507 400 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 CRKP46108 304 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 LPIN2Q92539 896 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 KIF12Q96FN5 646 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-206ENST00000566779 TCP10L2B9ZVM9 353 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 CIAO1O76071 339 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 SLC10A3P09131 477 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 FGFR2P21802 821 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 ADORA1P30542 326 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 IL15P40933 162 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 CACNB3P54284 484 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 ZBED3Q96IU2 234 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-206ENST00000566779 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 MYO5AQ9Y4I1 1855 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 SSC5DA1L4H1 1573 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 PHKA1P46020 1223 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 MMP14P50281 582 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 FKBP1BP68106 108 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 TFCP2Q12800 502 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
GTF3C1-206ENST00000566779 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms