RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
CDT1-202ENST00000562747 CERS5Q8N5B7 392 aa20.54■□□□□ 0.88
CDT1-202ENST00000562747 LPIN2Q92539 896 aa20.54■□□□□ 0.88
CDT1-202ENST00000562747 PCDHAC2Q9Y5I4 1007 aa20.54■□□□□ 0.88
CDT1-202ENST00000562747 GPR25O00155 361 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 SLC5A1P13866 664 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 NF2P35240 595 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 MMP14P50281 582 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 POLA2Q14181 598 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 FBXO33Q7Z6M2 555 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 APOBEC3FQ8IUX4 373 aaKnown RBP20.53■□□□□ 0.88
CDT1-202ENST00000562747 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
CDT1-202ENST00000562747 CHMP4BQ9H444 224 aaKnown RBP20.53■□□□□ 0.88
CDT1-202ENST00000562747 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 HDAC9Q9UKV0 1011 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 COG6Q9Y2V7 657 aa20.53■□□□□ 0.88
CDT1-202ENST00000562747 COL1A1P02452 1464 aaPredicted RBP20.52■□□□□ 0.88
CDT1-202ENST00000562747 FKBP1AP62942 108 aaKnown RBP20.52■□□□□ 0.88
CDT1-202ENST00000562747 SSH3Q8TE77 659 aa20.52■□□□□ 0.88
CDT1-202ENST00000562747 LDLRAD1Q5T700 205 aa20.51■□□□□ 0.87
CDT1-202ENST00000562747 ARMC9Q7Z3E5 817 aa20.51■□□□□ 0.87
CDT1-202ENST00000562747 AOX1Q06278 1338 aa20.51■□□□□ 0.87
CDT1-202ENST00000562747 FAM205AQ6ZU69 1335 aa20.51■□□□□ 0.87
CDT1-202ENST00000562747 OTOFQ9HC10 1997 aa20.5■□□□□ 0.87
CDT1-202ENST00000562747 ATP2B3Q16720 1220 aa20.5■□□□□ 0.87
CDT1-202ENST00000562747 SPRYD7Q5W111 196 aa20.5■□□□□ 0.87
CDT1-202ENST00000562747 ANGEL1Q9UNK9 670 aaKnown RBP20.5■□□□□ 0.87
CDT1-202ENST00000562747 SREBF2Q12772 1141 aa20.49■□□□□ 0.87
CDT1-202ENST00000562747 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
CDT1-202ENST00000562747 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
CDT1-202ENST00000562747 NOM1Q5C9Z4 860 aaKnown RBP20.49■□□□□ 0.87
CDT1-202ENST00000562747 CEP85Q6P2H3 762 aa20.49■□□□□ 0.87
CDT1-202ENST00000562747 CFHR5Q9BXR6 569 aa20.49■□□□□ 0.87
CDT1-202ENST00000562747 BCAMP50895 628 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 C20orf194Q5TEA3 1177 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 CLMNQ96JQ2 1002 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 DEFB129Q9H1M3 183 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 ZBTB40Q9NUA8 1239 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 AKAP2Q9Y2D5 859 aa20.48■□□□□ 0.87
CDT1-202ENST00000562747 ARAP2Q8WZ64 1704 aa20.47■□□□□ 0.87
CDT1-202ENST00000562747 TFCP2Q12800 502 aa20.47■□□□□ 0.87
CDT1-202ENST00000562747 DLGAP5Q15398 846 aa20.47■□□□□ 0.87
CDT1-202ENST00000562747 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.47■□□□□ 0.87
CDT1-202ENST00000562747 CLRN2A0PK11 232 aa20.46■□□□□ 0.87
CDT1-202ENST00000562747 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
CDT1-202ENST00000562747 FKTNO75072 461 aa20.46■□□□□ 0.87
CDT1-202ENST00000562747 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
CDT1-202ENST00000562747 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
CDT1-202ENST00000562747 FBXO46Q6PJ61 603 aaPredicted RBP20.46■□□□□ 0.87
CDT1-202ENST00000562747 MTMR14Q8NCE2 650 aa20.46■□□□□ 0.87
CDT1-202ENST00000562747 JAG2Q9Y219 1238 aa20.46■□□□□ 0.87
CDT1-202ENST00000562747 NOP58Q9Y2X3 529 aaKnown RBP20.46■□□□□ 0.87
CDT1-202ENST00000562747 MFSD14BQ5SR56 506 aa20.45■□□□□ 0.86
CDT1-202ENST00000562747 PRPF38BQ5VTL8 546 aaKnown RBP20.45■□□□□ 0.86
CDT1-202ENST00000562747 RPAP2Q8IXW5 612 aaPredicted RBP20.45■□□□□ 0.86
CDT1-202ENST00000562747 TBC1D22AQ8WUA7 517 aa20.45■□□□□ 0.86
CDT1-202ENST00000562747 IQSEC3Q9UPP2 1182 aaPredicted RBP20.45■□□□□ 0.86
CDT1-202ENST00000562747 HTTP42858 3142 aa20.45■□□□□ 0.86
CDT1-202ENST00000562747 A0A1B0GUL7 405 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 SPDYE2BA6NHP3 402 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 IGF2BP3O00425 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDT1-202ENST00000562747 ZBTB22O15209 634 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
CDT1-202ENST00000562747 SPDYE6P0CI01 402 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 RRP1P56182 461 aaKnown RBP20.44■□□□□ 0.86
CDT1-202ENST00000562747 CFAP100Q494V2 611 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 WNK4Q96J92 1243 aa20.44■□□□□ 0.86
CDT1-202ENST00000562747 PRMT6Q96LA8 375 aaPredicted RBP20.44■□□□□ 0.86
CDT1-202ENST00000562747 GNL3LQ9NVN8 582 aaKnown RBP20.44■□□□□ 0.86
CDT1-202ENST00000562747 TIMM10P62072 90 aa20.43■□□□□ 0.86
CDT1-202ENST00000562747 OS9Q13438 667 aaPredicted RBP20.43■□□□□ 0.86
CDT1-202ENST00000562747 IFNL1Q8IU54 200 aa20.43■□□□□ 0.86
CDT1-202ENST00000562747 SEMA3EO15041 775 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 GJA5P36382 358 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
CDT1-202ENST00000562747 NBPF12Q5TAG4 269 aaPredicted RBP20.42■□□□□ 0.86
CDT1-202ENST00000562747 SLC10A4Q96EP9 437 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 GPR108Q9NPR9 543 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 PPP2R3BQ9Y5P8 575 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
CDT1-202ENST00000562747 MYH13Q9UKX3 1938 aa20.42■□□□□ 0.86
CDT1-202ENST00000562747 MANSC4A6NHS7 340 aaPredicted RBP20.41■□□□□ 0.86
CDT1-202ENST00000562747 HMMRO75330 724 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 ADORA1P30542 326 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 XAGE2Q96GT9 111 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 VEZTQ9HBM0 779 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 SUGT1Q9Y2Z0 365 aa20.41■□□□□ 0.86
CDT1-202ENST00000562747 ALDH1A1P00352 501 aa20.4■□□□□ 0.86
CDT1-202ENST00000562747 ZBTB48P10074 688 aaPredicted RBP20.4■□□□□ 0.86
CDT1-202ENST00000562747 PHKA1P46020 1223 aa20.4■□□□□ 0.86
CDT1-202ENST00000562747 RBBP6Q7Z6E9 1792 aaKnown RBP20.4■□□□□ 0.86
CDT1-202ENST00000562747 NEUROD6Q96NK8 337 aa20.4■□□□□ 0.86
CDT1-202ENST00000562747 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
CDT1-202ENST00000562747 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
CDT1-202ENST00000562747 PPP1R12BO60237 982 aaPredicted RBP20.39■□□□□ 0.85
CDT1-202ENST00000562747 HSP90AB4PQ58FF6 505 aa20.39■□□□□ 0.85
CDT1-202ENST00000562747 OTOP1Q7RTM1 612 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms