RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NAT10Q9H0A0 1025 aaKnown RBP21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 KIAA0232Q92628 1395 aa21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 PDCP20941 246 aa21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 CCT5P48643 541 aa21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 ZKSCAN8Q15776 578 aaPredicted RBP21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 UTP14AQ9BVJ6 771 aaKnown RBP21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 BSDC1Q9NW68 430 aaPredicted RBP21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 SALL3Q9BXA9 1300 aa21.99■■□□□ 1.11
SEMA4B-215ENST00000560089 ST3GAL1Q11201 340 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 PRPF38AQ8NAV1 312 aaKnown RBP21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 ABCB6Q9NP58 842 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 VWA3AA6NCI4 1184 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 USP5P45974 858 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 DDR1Q08345 913 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 CASP8Q14790 479 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 C8orf58Q8NAV2 365 aa21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 TRIM6Q9C030 488 aaPredicted RBP21.98■■□□□ 1.11
SEMA4B-215ENST00000560089 SOS2Q07890 1332 aaPredicted RBP21.97■■□□□ 1.11
SEMA4B-215ENST00000560089 ECM2O94769 699 aaPredicted RBP21.97■■□□□ 1.11
SEMA4B-215ENST00000560089 DHX58Q96C10 678 aa21.97■■□□□ 1.11
SEMA4B-215ENST00000560089 CHMP4BP1P59074 171 aa21.97■■□□□ 1.11
SEMA4B-215ENST00000560089 ANKZF1Q9H8Y5 726 aa21.97■■□□□ 1.11
SEMA4B-215ENST00000560089 POTEB2H3BUK9 544 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 ME3Q16798 604 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 ZKSCAN4Q969J2 545 aaPredicted RBP21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 CD248Q9HCU0 757 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 ZBTB12Q9Y330 459 aaPredicted RBP21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 RNF40O75150 1001 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 ODF2LQ9ULJ1 636 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 CAPN7Q9Y6W3 813 aa21.96■■□□□ 1.11
SEMA4B-215ENST00000560089 LRRCC1Q9C099 1032 aa21.95■■□□□ 1.1
SEMA4B-215ENST00000560089 PNKPQ96T60 521 aa21.95■■□□□ 1.1
SEMA4B-215ENST00000560089 RAB21Q9UL25 225 aa21.95■■□□□ 1.1
SEMA4B-215ENST00000560089 CHUKO15111 745 aa21.94■■□□□ 1.1
SEMA4B-215ENST00000560089 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
SEMA4B-215ENST00000560089 PIP4K2BP78356 416 aa21.94■■□□□ 1.1
SEMA4B-215ENST00000560089 CRYMQ14894 314 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 PREPLQ4J6C6 727 aaPredicted RBP21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 PPP2R2CQ9Y2T4 447 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 TBC1D8BQ0IIM8 1120 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 ITFG2Q969R8 447 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 JAKMIP1Q96N16 626 aaKnown RBP21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 PRDM11Q9NQV5 511 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 IL17REQ8NFR9 667 aa21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 LSG1Q9H089 658 aaKnown RBP21.93■■□□□ 1.1
SEMA4B-215ENST00000560089 WDHD1O75717 1129 aaPredicted RBP21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 SRGAP1Q7Z6B7 1085 aa21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 FCHSD1Q86WN1 690 aa21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 AP1ARQ63HQ0 302 aa21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 KIFC2Q96AC6 838 aa21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 PUF60Q9UHX1 559 aaKnown RBP21.92■■□□□ 1.1
SEMA4B-215ENST00000560089 MYO1FO00160 1098 aa21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 KINO60870 393 aaKnown RBP21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 CCAR1Q8IX12 1150 aaKnown RBP21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 BORCS6Q96GS4 357 aa21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 LGR6Q9HBX8 967 aa21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 CYP46A1Q9Y6A2 500 aa21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 LARP1Q6PKG0 1096 aaKnown RBP21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 MSANTD4Q8NCY6 345 aa21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 ERCC4Q92889 916 aaPredicted RBP21.91■■□□□ 1.1
SEMA4B-215ENST00000560089 ADCY9O60503 1353 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 GOLGA6L9A6NEM1 432 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 IQCA1Q86XH1 822 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 GBP3Q9H0R5 595 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 ANKRD33BA6NCL7 494 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 CCNHP51946 323 aaPredicted RBP21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 ATP2B2Q01814 1243 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 ZNF530Q6P9A1 599 aaPredicted RBP21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 MPRIPQ6WCQ1 1025 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 CCDC73Q6ZRK6 1079 aa21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 CCDC12Q8WUD4 166 aaPredicted RBP21.9■■□□□ 1.1
SEMA4B-215ENST00000560089 TMCO5BA8MYB1 307 aa21.89■■□□□ 1.1
SEMA4B-215ENST00000560089 CCDC9Q9Y3X0 531 aaKnown RBP21.89■■□□□ 1.1
SEMA4B-215ENST00000560089 LRRIQ3A6PVS8 624 aaPredicted RBP21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 MAP4K4O95819 1239 aaPredicted RBP21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 IBSPP21815 317 aaPredicted RBP21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 FMNL2Q96PY5 1086 aa21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 ETAA1Q9NY74 926 aa21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 STAP2Q9UGK3 403 aa21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 TSPYL4Q9UJ04 414 aa21.89■■□□□ 1.09
SEMA4B-215ENST00000560089 CUTAO60888 179 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 CEP112Q8N8E3 955 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 CRB1P82279 1406 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 TTC36A6NLP5 189 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 CHL1O00533 1208 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 CEBPZQ03701 1054 aaKnown RBP21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 ADCK5Q3MIX3 580 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 TPCN1Q9ULQ1 816 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 MRPL12P52815 198 aaKnown RBP21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 VSNL1P62760 191 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 ADCY2Q08462 1091 aa21.88■■□□□ 1.09
SEMA4B-215ENST00000560089 RHOXF2BP0C7M4 288 aa21.87■■□□□ 1.09
SEMA4B-215ENST00000560089 RHOXF2Q9BQY4 288 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms