RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 STK38LQ9Y2H1 464 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 SMARCA5O60264 1052 aaPredicted RBP15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 SLC12A2P55011 1212 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 PLCB4Q15147 1175 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 RPL13P26373 211 aaKnown RBP15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 MTMR3Q13615 1198 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 MRPS27Q92552 414 aaKnown RBP15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 CNNM2Q9H8M5 875 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 SPC25Q9HBM1 224 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 SCHIP1Q9P0W5 487 aaPredicted RBP15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 VPS41P49754 854 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 PNMA8AQ86V59 439 aaPredicted RBP15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 HELBQ8NG08 1087 aaPredicted RBP15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 TRIM14Q14142 442 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 DENND2CQ68D51 928 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 ALG1Q9BT22 464 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 SLC8A1P32418 973 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCDC124Q96CT7 223 aaKnown RBP15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 MRRFQ96E11 262 aaKnown RBP15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 KRT9P35527 623 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 NBPF6Q5VWK0 638 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 NBPF4Q96M43 638 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 PARP2Q9UGN5 583 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 HSP90AA4PQ58FG1 418 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 SPDL1Q96EA4 605 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 CABS1Q96KC9 395 aa15.47■□□□□ 0.07
CSPG4P12-202ENST00000559989 RTN1Q16799 776 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 SYT10Q6XYQ8 523 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 NAPGQ99747 312 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 GOLGA8QA0A0J9YX86 632 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 GOLGA8OA6NCC3 632 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 SPDYE3A6NKU9 549 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 GOLGA8NF8WBI6 632 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 AKR1B15C9JRZ8 316 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 PPP1R2P41236 205 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 GIMAP4Q9NUV9 329 aa15.46■□□□□ 0.07
CSPG4P12-202ENST00000559989 MYCBPQ99417 103 aaPredicted RBP15.46■□□□□ 0.06
CSPG4P12-202ENST00000559989 EVCP57679 992 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 CASC4Q6P4E1 433 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 TRIM56Q9BRZ2 755 aaKnown RBP15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ZBTB43O43298 467 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 DCAF17Q5H9S7 520 aaPredicted RBP15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 KRT2P35908 639 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ZGPATQ8N5A5 531 aaKnown RBP15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ARHGAP42A6NI28 874 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 HNRNPCL2B2RXH8 293 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 HNRNPCL1O60812 293 aaKnown RBP15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 KIF11P52732 1056 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 P3H4Q92791 437 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 HIP1RO75146 1068 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ATICP31939 592 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ANKRD20A4Q4UJ75 823 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ANKRD20A8PQ5CZ79 823 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ANKRD20A2Q5SQ80 823 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ANKRD20A1Q5TYW2 823 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 LRGUKQ96M69 825 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 LRRD1A4D1F6 860 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 CALML3P27482 149 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 CTTNBP2NLQ9P2B4 639 aa15.45■□□□□ 0.06
CSPG4P12-202ENST00000559989 ARHGAP4P98171 946 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 ATP6V0A1Q93050 837 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 BAIAP2L1Q9UHR4 511 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 RNF40O75150 1001 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 BAG2O95816 211 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 DUSP27Q5VZP5 1158 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 ZKSCAN5Q9Y2L8 839 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 NAPAP54920 295 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 UTP14CQ5TAP6 766 aaKnown RBP15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 TTC4O95801 387 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 TNFAIP3P21580 790 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 HS1BP3Q53T59 392 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 FNBP1Q96RU3 617 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 RLBP1P12271 317 aa15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 SPATS2Q86XZ4 545 aaKnown RBP15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
CSPG4P12-202ENST00000559989 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 NXNQ6DKJ4 435 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 CYP26C1Q6V0L0 522 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 DHX58Q96C10 678 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 EPS15L1Q9UBC2 864 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 ASIC2Q16515 512 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 KRT79Q5XKE5 535 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 NLRP7Q8WX94 980 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms