RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 PTPRMP28827 1452 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 UNC13BO14795 1591 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 J3QW42 95 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-209ENST00000558861 MLECQ14165 292 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 OSBPL7Q9BZF2 842 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 NAGPAQ9UK23 515 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 CNTLNQ9NXG0 1405 aa8.88□□□□□ -0.99
LRRC28-209ENST00000558861 A0A1W2PP55 124 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 TRPA1O75762 1119 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 RECKO95980 971 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 ADH7P40394 386 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 GGT6Q6P531 493 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 CEP120Q8N960 986 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 TNFRSF25Q93038 417 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 MDFIQ99750 246 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 ZKSCAN3Q9BRR0 538 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 SPG7Q9UQ90 795 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 ARHGAP31Q2M1Z3 1444 aa8.87□□□□□ -0.99
LRRC28-209ENST00000558861 LOC102724428A0A0B4J2F2 783 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 SORBS3O60504 671 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
LRRC28-209ENST00000558861 SIK1P57059 783 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 GRM2Q14416 872 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 OXCT2Q9BYC2 517 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-209ENST00000558861 BCO2Q9BYV7 579 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 SETD5Q9C0A6 1442 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
LRRC28-209ENST00000558861 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 CPB1P15086 417 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 VAMP1P23763 118 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 ATP11AP98196 1134 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 SRSF11Q05519 484 aaKnown RBP8.85□□□□□ -0.99
LRRC28-209ENST00000558861 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 NXPE4Q6UWF7 544 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 FAM35AQ86V20 835 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 OSMRQ99650 979 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 EHD4Q9H223 541 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 C12orf49Q9H741 205 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 DZANK1Q9NVP4 752 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 AK5Q9Y6K8 562 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 FER1L4A9Z1Z3 1794 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 NPATQ14207 1427 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 MROH2AA6NES4 1674 aa8.85□□□□□ -0.99
LRRC28-209ENST00000558861 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
LRRC28-209ENST00000558861 PZPP20742 1482 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 ADARB2-AS1A8MUL3 147 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 GOLGA6L1Q8N7Z2 621 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 ACDQ96AP0 544 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 SPACA7Q96KW9 195 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
LRRC28-209ENST00000558861 IQGAP3Q86VI3 1631 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 WASHC2CQ9Y4E1 1318 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 GHRHP01286 108 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 EIF4BP23588 611 aaKnown RBP8.83□□□□□ -1
LRRC28-209ENST00000558861 GMPRP36959 345 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 CEBPAP49715 358 aaPredicted RBP8.83□□□□□ -1
LRRC28-209ENST00000558861 PCSK7Q16549 785 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 GLIS3Q8NEA6 775 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 FRMD6Q96NE9 622 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 TCF12Q99081 682 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 BACH2Q9BYV9 841 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 LIN7BQ9HAP6 207 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
LRRC28-209ENST00000558861 ZC3H13Q5T200 1668 aaKnown RBP8.83□□□□□ -1
LRRC28-209ENST00000558861 EFCAB6Q5THR3 1501 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 NUP155O75694 1391 aa8.83□□□□□ -1
LRRC28-209ENST00000558861 C3P01024 1663 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 NOS1P29475 1434 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
LRRC28-209ENST00000558861 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
LRRC28-209ENST00000558861 CTSHP09668 335 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 PERM1Q5SV97 790 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 C1orf229Q6ZS94 237 aaPredicted RBP8.82□□□□□ -1
LRRC28-209ENST00000558861 ELOA3Q8NG57 546 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 ZNF775Q96BV0 537 aaPredicted RBP8.82□□□□□ -1
LRRC28-209ENST00000558861 GDF2Q9UK05 429 aaPredicted RBP8.82□□□□□ -1
LRRC28-209ENST00000558861 SPATA31D1Q6ZQQ2 1576 aa8.82□□□□□ -1
LRRC28-209ENST00000558861 CEP152O94986 1710 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 METTL12A8MUP2 240 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 NFKBIEO00221 500 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 WFS1O76024 890 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 EPXP11678 715 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 CCNJLQ8IV13 435 aa8.81□□□□□ -1
LRRC28-209ENST00000558861 PLD4Q96BZ4 506 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms