RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 VPS37DQ86XT2 251 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 TMEM57Q8N5G2 664 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 ARAP2Q8WZ64 1704 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 MYH13Q9UKX3 1938 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 AOX1Q06278 1338 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 SLC5A1P13866 664 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 IL15P40933 162 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 GRIK5Q16478 980 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 RGMBQ6NW40 437 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 LPIN2Q92539 896 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 ZIC5Q96T25 663 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SNRPA1-206ENST00000558059 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 FAM155AB1AL88 458 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 GNAI2P04899 355 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 RLBP1P12271 317 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 FKBP1BP68106 108 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 CHAF1AQ13111 956 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 MOB2Q70IA6 237 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 APOBEC3FQ8IUX4 373 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-206ENST00000558059 POTEMA6NI47 508 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 FRAT2O75474 233 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 HSPA8P11142 646 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 NOGQ13253 232 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 ATP2B3Q16720 1220 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 TBC1D22AQ8WUA7 517 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 SERPINA10Q9UK55 444 aa10.92□□□□□ -0.66
SNRPA1-206ENST00000558059 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 UBE2Q2LH0YL09 131 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 ADORA1P30542 326 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 CRKP46108 304 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 ZNF157P51786 506 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 RBM5P52756 815 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 LBX1P52954 281 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 HDLBPQ00341 1268 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 DEFB129Q9H1M3 183 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
SNRPA1-206ENST00000558059 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 MYO1BO43795 1136 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 SLC10A3P09131 477 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 C7P10643 843 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 PHKA1P46020 1223 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 TIMM10P62072 90 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 FTSJ3Q8IY81 847 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 MRIQ9BWK5 157 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 ZNF70Q9UC06 446 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 SUGT1Q9Y2Z0 365 aa10.9□□□□□ -0.66
SNRPA1-206ENST00000558059 NF2P35240 595 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 ATP8B2P98198 1209 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 KIF23Q02241 960 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 TFCP2Q12800 502 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 RASA3Q14644 834 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 RASAL3Q86YV0 1011 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 TDRD3Q9H7E2 651 aaKnown RBP10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 PPP2R3BQ9Y5P8 575 aa10.89□□□□□ -0.67
SNRPA1-206ENST00000558059 A0A1B0GUL7 405 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 SSC5DA1L4H1 1573 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 PRKG1Q13976 671 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 NBPF12Q5TAG4 269 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 CCDC102BQ68D86 513 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 APOBEC3HQ6NTF7 200 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 PANK1Q8TE04 598 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 ZDHHC15Q96MV8 337 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 CSRNP1Q96S65 589 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 GNL3LQ9NVN8 582 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 FZD1Q9UP38 647 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
SNRPA1-206ENST00000558059 SEMA3EO15041 775 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 CA12O43570 354 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms