RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 RILPL2Q969X0 211 aa9□□□□□ -0.97
SPG11-204ENST00000557866 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
SPG11-204ENST00000557866 USP26Q9BXU7 913 aa9□□□□□ -0.97
SPG11-204ENST00000557866 PUS3Q9BZE2 481 aaKnown RBP9□□□□□ -0.97
SPG11-204ENST00000557866 TOR4AQ9NXH8 423 aa9□□□□□ -0.97
SPG11-204ENST00000557866 TRMT112Q9UI30 125 aaKnown RBP9□□□□□ -0.97
SPG11-204ENST00000557866 CCNL1Q9UK58 526 aaPredicted RBP9□□□□□ -0.97
SPG11-204ENST00000557866 FPGT-TNNI3KV9GXZ4 949 aa9□□□□□ -0.97
SPG11-204ENST00000557866 WNT7AO00755 349 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 RPS6KA4O75676 772 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 CIAO1O76071 339 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 NTSR2O95665 410 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 KRT27Q7Z3Y8 459 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 ESYT1Q9BSJ8 1104 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
SPG11-204ENST00000557866 TBC1D2Q9BYX2 928 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 IL25Q9H293 177 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 GREM2Q9H772 168 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 LRRC4BQ9NT99 713 aa8.99□□□□□ -0.97
SPG11-204ENST00000557866 DBNLQ9UJU6 430 aaKnown RBP8.99□□□□□ -0.97
SPG11-204ENST00000557866 MYH14Q7Z406 1995 aaKnown RBP8.99□□□□□ -0.97
SPG11-204ENST00000557866 AFDNP55196 1824 aaKnown RBP8.98□□□□□ -0.97
SPG11-204ENST00000557866 KAT6BQ8WYB5 2073 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 NHSQ6T4R5 1651 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 ERC2O15083 957 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 PDE8AO60658 829 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 HCLS1P14317 486 aaPredicted RBP8.98□□□□□ -0.97
SPG11-204ENST00000557866 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
SPG11-204ENST00000557866 PDE4DQ08499 809 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 MTMR2Q13614 643 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 CCDC57Q2TAC2 916 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 NUDT12Q9BQG2 462 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 DBNDD2Q9BQY9 259 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
SPG11-204ENST00000557866 SRP68Q9UHB9 627 aaKnown RBP8.98□□□□□ -0.97
SPG11-204ENST00000557866 NIP7Q9Y221 180 aaKnown RBP eCLIP8.98□□□□□ -0.97
SPG11-204ENST00000557866 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
SPG11-204ENST00000557866 FAM177BA6PVY3 158 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 ATP5JP18859 108 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 ITGA6P23229 1130 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 RBM6P78332 1123 aaKnown RBP8.97□□□□□ -0.97
SPG11-204ENST00000557866 IFIT5Q13325 482 aaKnown RBP8.97□□□□□ -0.97
SPG11-204ENST00000557866 CASC1Q6TDU7 716 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 FAM196AQ6ZSG2 479 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 CNTROBQ8N137 903 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 GPATCH3Q96I76 525 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 GPR108Q9NPR9 543 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 NARFQ9UHQ1 456 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 RIPOR2Q9Y4F9 1068 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 SH3TC1Q8TE82 1336 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 ZNF831Q5JPB2 1677 aa8.97□□□□□ -0.97
SPG11-204ENST00000557866 TRIM37O94972 964 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 WNT7BP56706 349 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 TIMM10P62072 90 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 USPL1Q5W0Q7 1092 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 TBC1D9BQ66K14 1250 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.98
SPG11-204ENST00000557866 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.98
SPG11-204ENST00000557866 EDC3Q96F86 508 aaKnown RBP8.96□□□□□ -0.98
SPG11-204ENST00000557866 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 COL5A3P25940 1745 aaPredicted RBP8.96□□□□□ -0.98
SPG11-204ENST00000557866 BTAF1O14981 1849 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 RIC1Q4ADV7 1423 aa8.96□□□□□ -0.98
SPG11-204ENST00000557866 ANKRD18BA2A2Z9 1011 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 SPTLC1O15269 473 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 SGSM2O43147 1006 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 EIF5BO60841 1220 aaKnown RBP8.95□□□□□ -0.98
SPG11-204ENST00000557866 REC8O95072 547 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 ADORA1P30542 326 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 VGLL2Q8N8G2 317 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 SNIP1Q8TAD8 396 aaKnown RBP8.95□□□□□ -0.98
SPG11-204ENST00000557866 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 EVI5LQ96CN4 794 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 HAUS7Q99871 368 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 CEP126Q9P2H0 1117 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
SPG11-204ENST00000557866 RTCBQ9Y3I0 505 aaKnown RBP8.95□□□□□ -0.98
SPG11-204ENST00000557866 ZNF609O15014 1411 aa8.95□□□□□ -0.98
SPG11-204ENST00000557866 TUBGCP6Q96RT7 1819 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 A0A1B0GUL7 405 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 AVPP01185 164 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 CCNYL3P0C7X3 344 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 PTPRNQ16849 979 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 ERFEQ4G0M1 354 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 LDHAL6AQ6ZMR3 332 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 BICDL1Q6ZP65 573 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 SNX21Q969T3 373 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 MRGPRX2Q96LB1 330 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 NEUROD6Q96NK8 337 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 LSG1Q9H089 658 aaKnown RBP8.94□□□□□ -0.98
SPG11-204ENST00000557866 NDUFB9Q9Y6M9 179 aa8.94□□□□□ -0.98
SPG11-204ENST00000557866 BECN1Q14457 450 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 METTL24Q5JXM2 366 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms