RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 SLC4A10Q6U841 1118 aa11.47□□□□□ -0.57
NPC2-209ENST00000557510 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
NPC2-209ENST00000557510 PUS3Q9BZE2 481 aaKnown RBP11.47□□□□□ -0.57
NPC2-209ENST00000557510 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
NPC2-209ENST00000557510 ARAP2Q8WZ64 1704 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 ZNF521Q96K83 1311 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 TBC1D8O95759 1140 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 IL1R1P14778 569 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 MLLT1Q03111 559 aaPredicted RBP11.46□□□□□ -0.57
NPC2-209ENST00000557510 APOBEC3FQ8IUX4 373 aaKnown RBP11.46□□□□□ -0.57
NPC2-209ENST00000557510 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 HDAC9Q9UKV0 1011 aa11.46□□□□□ -0.57
NPC2-209ENST00000557510 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
NPC2-209ENST00000557510 NBR1Q14596 966 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 ZNF804AQ7Z570 1209 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 PRMT6Q96LA8 375 aaPredicted RBP11.45□□□□□ -0.58
NPC2-209ENST00000557510 R3HDMLQ9H3Y0 253 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 C9orf78Q9NZ63 289 aaPredicted RBP11.45□□□□□ -0.58
NPC2-209ENST00000557510 LAMB1P07942 1786 aa11.45□□□□□ -0.58
NPC2-209ENST00000557510 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 NF2P35240 595 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 GYG1P46976 350 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 SOX10P56693 466 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 DLGAP5Q15398 846 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 CFAP100Q494V2 611 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 LDLRAD1Q5T700 205 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 MTMR14Q8NCE2 650 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 ZNF296Q8WUU4 475 aaPredicted RBP11.44□□□□□ -0.58
NPC2-209ENST00000557510 CLMNQ96JQ2 1002 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 CNNM1Q9NRU3 951 aa11.44□□□□□ -0.58
NPC2-209ENST00000557510 ANGEL1Q9UNK9 670 aaKnown RBP11.44□□□□□ -0.58
NPC2-209ENST00000557510 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
NPC2-209ENST00000557510 TM4SF4P48230 202 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 GRIK5Q16478 980 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
NPC2-209ENST00000557510 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 ANKRD44Q8N8A2 993 aa11.43□□□□□ -0.58
NPC2-209ENST00000557510 FAM84BQ96KN1 310 aaPredicted RBP11.43□□□□□ -0.58
NPC2-209ENST00000557510 BICC1Q9H694 974 aaKnown RBP11.43□□□□□ -0.58
NPC2-209ENST00000557510 COL1A1P02452 1464 aaPredicted RBP11.43□□□□□ -0.58
NPC2-209ENST00000557510 UTYO14607 1347 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 MMP14P50281 582 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 LRRC24Q50LG9 513 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 NBPF12Q5TAG4 269 aaPredicted RBP11.42□□□□□ -0.58
NPC2-209ENST00000557510 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 ARMC9Q7Z3E5 817 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 MRPL50Q8N5N7 158 aaKnown RBP11.42□□□□□ -0.58
NPC2-209ENST00000557510 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
NPC2-209ENST00000557510 VEZTQ9HBM0 779 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 RIPOR2Q9Y4F9 1068 aa11.42□□□□□ -0.58
NPC2-209ENST00000557510 FAM205AQ6ZU69 1335 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
NPC2-209ENST00000557510 MFSD14BQ5SR56 506 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 KLHDC4Q8TBB5 520 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 IQSEC3Q9UPP2 1182 aaPredicted RBP11.41□□□□□ -0.58
NPC2-209ENST00000557510 MYH13Q9UKX3 1938 aa11.41□□□□□ -0.58
NPC2-209ENST00000557510 GPR25O00155 361 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 HIBADHP31937 336 aaKnown RBP11.4□□□□□ -0.58
NPC2-209ENST00000557510 GJA5P36382 358 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 RBM5P52756 815 aaKnown RBP eCLIP11.4□□□□□ -0.58
NPC2-209ENST00000557510 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 RASA3Q14644 834 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
NPC2-209ENST00000557510 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 VGLL2Q8N8G2 317 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 WNK4Q96J92 1243 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
NPC2-209ENST00000557510 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
NPC2-209ENST00000557510 KIAA0100Q14667 2235 aaKnown RBP11.4□□□□□ -0.58
NPC2-209ENST00000557510 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
NPC2-209ENST00000557510 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
NPC2-209ENST00000557510 SREBF2Q12772 1141 aa11.39□□□□□ -0.59
NPC2-209ENST00000557510 SLC10A4Q96EP9 437 aa11.39□□□□□ -0.59
NPC2-209ENST00000557510 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
NPC2-209ENST00000557510 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
NPC2-209ENST00000557510 ZNF70Q9UC06 446 aaPredicted RBP11.39□□□□□ -0.59
NPC2-209ENST00000557510 PPP2R3BQ9Y5P8 575 aa11.39□□□□□ -0.59
NPC2-209ENST00000557510 MYO1BO43795 1136 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 CHAF1AQ13111 956 aaPredicted RBP11.38□□□□□ -0.59
NPC2-209ENST00000557510 FBXO33Q7Z6M2 555 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 DZIP1LQ8IYY4 767 aaKnown RBP11.38□□□□□ -0.59
NPC2-209ENST00000557510 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 TEPSINQ96N21 525 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 CFHR5Q9BXR6 569 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
NPC2-209ENST00000557510 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
NPC2-209ENST00000557510 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
NPC2-209ENST00000557510 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
NPC2-209ENST00000557510 CRKP46108 304 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms