RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-245ENST00000556958 UNC80Q8N2C7 3258 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 USP17L3A6NCW0 530 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 USP17L4A6NCW7 530 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 SGPL1O95470 568 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 TFRCP02786 760 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 HCLS1P14317 486 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 IREB2P48200 963 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 CAP1Q01518 475 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 USP17L1Q7RTZ2 530 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 LAPTM4BQ86VI4 370 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 TBC1D16Q8TBP0 767 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 U2AF1L4Q8WU68 220 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 UBE2OQ9C0C9 1292 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 RRP7AQ9Y3A4 280 aaKnown RBP7.66□□□□□ -1.18
ATXN3-245ENST00000556958 IRS2Q9Y4H2 1338 aa7.66□□□□□ -1.18
ATXN3-245ENST00000556958 WNT10BO00744 389 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
ATXN3-245ENST00000556958 PDE4AP27815 886 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 GPSM2P81274 684 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-245ENST00000556958 MAP3K12Q12852 859 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 NBR1Q14596 966 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 TJAP1Q5JTD0 557 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 TTLL7Q6ZT98 887 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 MAFAQ8NHW3 353 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-245ENST00000556958 CEMIPQ8WUJ3 1361 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 CLMNQ96JQ2 1002 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 GUCD1Q96NT3 240 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
ATXN3-245ENST00000556958 RIPOR2Q9Y4F9 1068 aa7.65□□□□□ -1.18
ATXN3-245ENST00000556958 SYNGAP1Q96PV0 1343 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 TLR2O60603 784 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 GTF2A2P52657 109 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 NECAB2Q7Z6G3 386 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 ANKRD13AQ8IZ07 590 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 SNX27Q96L92 541 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 DEFB129Q9H1M3 183 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 ANKIB1Q9P2G1 1089 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 SRRDQ9UH36 339 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 TRMT112Q9UI30 125 aaKnown RBP7.64□□□□□ -1.19
ATXN3-245ENST00000556958 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 CENPFP49454 3210 aa7.64□□□□□ -1.19
ATXN3-245ENST00000556958 VCANP13611 3396 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 FAM205AQ6ZU69 1335 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 SH3TC1Q8TE82 1336 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 MYO3BQ8WXR4 1341 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 MYL6BP14649 208 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 MAGEA10P43363 369 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-245ENST00000556958 RPS8P62241 208 aaKnown RBP7.63□□□□□ -1.19
ATXN3-245ENST00000556958 HSP90AB3PQ58FF7 597 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 GGA1Q9UJY5 639 aa7.63□□□□□ -1.19
ATXN3-245ENST00000556958 ZMYND8Q9ULU4 1186 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-245ENST00000556958 CCL15-CCL14A0A0B4J2E2 113 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 UFL1O94874 794 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 FMNL1O95466 1100 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-245ENST00000556958 PSMC4P43686 418 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-245ENST00000556958 CCL15Q16663 113 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 C7orf61Q8IZ16 206 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 CDX2Q99626 313 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-245ENST00000556958 ARHGAP39Q9C0H5 1083 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 PANK3Q9H999 370 aa7.62□□□□□ -1.19
ATXN3-245ENST00000556958 ZCCHC17Q9NP64 241 aaKnown RBP7.62□□□□□ -1.19
ATXN3-245ENST00000556958 V9GY48 417 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-245ENST00000556958 RBBP6Q7Z6E9 1792 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 U2SURPO15042 1029 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 GJA5P36382 358 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 SF3B3Q15393 1217 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 BRI3BPQ8WY22 251 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 CELF1Q92879 486 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 OPTNQ96CV9 577 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 PAWRQ96IZ0 340 aaKnown RBP7.61□□□□□ -1.19
ATXN3-245ENST00000556958 C1QTNF1Q9BXJ1 281 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 FZD1Q9UP38 647 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 KNSTRNQ9Y448 316 aa7.61□□□□□ -1.19
ATXN3-245ENST00000556958 PIEZO1Q92508 2521 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 KIF20BQ96Q89 1820 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 MYO1BO43795 1136 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 USP2O75604 605 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-245ENST00000556958 SASH1O94885 1247 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 CETPP11597 493 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 OSBPP22059 807 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 STRIP1Q5VSL9 837 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 NLRP10Q86W26 655 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 ANKLE1Q8NAG6 615 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 UNC93B1Q9H1C4 597 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 TSR3Q9UJK0 312 aaKnown RBP7.6□□□□□ -1.19
ATXN3-245ENST00000556958 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
ATXN3-245ENST00000556958 MYPNQ86TC9 1320 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms