RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PRDX5P30044 214 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 CRKP46108 304 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
SNX6-208ENST00000556712 SERPINA10Q9UK55 444 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 PCNTO95613 3336 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 MYO1BO43795 1136 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 CACNB3P54284 484 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 TDRD3Q9H7E2 651 aaKnown RBP12.81□□□□□ -0.36
SNX6-208ENST00000556712 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
SNX6-208ENST00000556712 MYO5AQ9Y4I1 1855 aaKnown RBP12.8□□□□□ -0.36
SNX6-208ENST00000556712 ECE1P42892 770 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 PRKG1Q13976 671 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
SNX6-208ENST00000556712 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
SNX6-208ENST00000556712 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
SNX6-208ENST00000556712 DENND2AQ9ULE3 1009 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
SNX6-208ENST00000556712 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
SNX6-208ENST00000556712 SEMA3EO15041 775 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
SNX6-208ENST00000556712 PDE3AQ14432 1141 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 CDAN1Q8IWY9 1227 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 DBNDD2Q9BQY9 259 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 MAST3O60307 1309 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 SALL1Q9NSC2 1324 aa12.79□□□□□ -0.36
SNX6-208ENST00000556712 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 APBB1O00213 710 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
SNX6-208ENST00000556712 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
SNX6-208ENST00000556712 MCAMP43121 646 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
SNX6-208ENST00000556712 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
SNX6-208ENST00000556712 FAM155AB1AL88 458 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 FOXN1O15353 648 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 NF2P35240 595 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 ZNF157P51786 506 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 RASA3Q14644 834 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 RASAL3Q86YV0 1011 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 GPR108Q9NPR9 543 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 DBNLQ9UJU6 430 aaKnown RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.37
SNX6-208ENST00000556712 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.37
SNX6-208ENST00000556712 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 SLC10A3P09131 477 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 FKBP1BP68106 108 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 SPATA5Q8NB90 893 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 IL1RAPL2Q9NP60 686 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
SNX6-208ENST00000556712 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
SNX6-208ENST00000556712 ZBTB22O15209 634 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 AACSQ86V21 672 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 DZIP1Q86YF9 867 aaKnown RBP12.75□□□□□ -0.37
SNX6-208ENST00000556712 RPAP2Q8IXW5 612 aaPredicted RBP12.75□□□□□ -0.37
SNX6-208ENST00000556712 ZGPATQ8N5A5 531 aaKnown RBP12.75□□□□□ -0.37
SNX6-208ENST00000556712 RHPN1Q8TCX5 695 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 ZNF384Q8TF68 577 aa12.75□□□□□ -0.37
SNX6-208ENST00000556712 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 HMMRO75330 724 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 TNNI2P48788 182 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
SNX6-208ENST00000556712 NOGQ13253 232 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms