RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-239ENST00000556315 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 CDK2AP1O14519 115 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 ARID3AQ99856 593 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 RRAGCQ9HB90 399 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-239ENST00000556315 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 A0A1W2PNR3 127 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 A6NJY4 79 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 ATXN7O15265 892 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-239ENST00000556315 TNP2Q05952 138 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 COL13A1Q5TAT6 717 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-239ENST00000556315 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-239ENST00000556315 NFATC2IPQ8NCF5 419 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 AIDAQ96BJ3 306 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 SUV39H2Q9H5I1 410 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 AVENQ9NQS1 362 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-239ENST00000556315 ZDHHC3Q9NYG2 299 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
ATXN3-239ENST00000556315 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-239ENST00000556315 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 NFAT5O94916 1531 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 NEURL1BA8MQ27 555 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 MAPTP10636 758 aaKnown RBP6.83□□□□□ -1.32
ATXN3-239ENST00000556315 AMPD1P23109 780 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 AMPHP49418 695 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 DGKGP49619 791 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-239ENST00000556315 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 ZIC5Q96T25 663 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 SERTAD1Q9UHV2 236 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 KLF15Q9UIH9 416 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
ATXN3-239ENST00000556315 NSD2O96028 1365 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 PALM3A6NDB9 673 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-239ENST00000556315 PIK3CDO00329 1044 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 PIK3R2O00459 728 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 GNB5O14775 395 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 ATP9BO43861 1147 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 FAM157BP0CG42 384 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 SKIP12755 728 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-239ENST00000556315 LZTS3O60299 673 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-239ENST00000556315 TATP17735 454 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-239ENST00000556315 SSFA2P28290 1259 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 HOXC9P31274 260 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 ARSJQ5FYB0 599 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-239ENST00000556315 SAMD5Q5TGI4 173 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-239ENST00000556315 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 COG3Q96JB2 828 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 TFIP11Q9UBB9 837 aaKnown RBP6.81□□□□□ -1.32
ATXN3-239ENST00000556315 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ATXN3-239ENST00000556315 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 K7ELQ4 463 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-239ENST00000556315 CD33P20138 364 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 ADH6P28332 368 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 GRIN2CQ14957 1233 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
ATXN3-239ENST00000556315 BCS1LQ9Y276 419 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-239ENST00000556315 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 USP17L5A8MUK1 530 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 BACH1O14867 736 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 EFSO43281 561 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 LMOD1P29536 600 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 HTRA3P83110 453 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 EML3Q32P44 896 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 CHSY3Q70JA7 882 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 PLEKHM2Q8IWE5 1019 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 SCHIP1Q9P0W5 487 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 MAFBQ9Y5Q3 323 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms