RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PIH1D3Q9NQM4 214 aaKnown RBP16.98■□□□□ 0.31
ACTN1-211ENST00000553882 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 GTF2F1P35269 517 aaKnown RBP eCLIP16.98■□□□□ 0.31
ACTN1-211ENST00000553882 ADALQ6DHV7 355 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
ACTN1-211ENST00000553882 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-211ENST00000553882 ADD2P35612 726 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 PHKA1P46020 1223 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 TRDNQ13061 729 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-211ENST00000553882 ANO10Q9NW15 660 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 SNAP23O00161 211 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 MYSM1Q5VVJ2 828 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
ACTN1-211ENST00000553882 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-211ENST00000553882 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.31
ACTN1-211ENST00000553882 CYB5R4Q7L1T6 521 aa16.96■□□□□ 0.31
ACTN1-211ENST00000553882 CEP57L1Q8IYX8 460 aa16.96■□□□□ 0.31
ACTN1-211ENST00000553882 INCENPQ9NQS7 918 aa16.96■□□□□ 0.31
ACTN1-211ENST00000553882 B4E1Z4 1266 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 BIN1O00499 593 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 SPTLC2O15270 562 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 CCDC102BQ68D86 513 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 MICU3Q86XE3 530 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.3
ACTN1-211ENST00000553882 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 PHKBQ93100 1093 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
ACTN1-211ENST00000553882 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
ACTN1-211ENST00000553882 PDE8BO95263 885 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-211ENST00000553882 DPCR1Q3MIW9 517 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 SARM1Q6SZW1 724 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 MTERF4Q7Z6M4 381 aaKnown RBP16.95■□□□□ 0.3
ACTN1-211ENST00000553882 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 MYL10Q9BUA6 226 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
ACTN1-211ENST00000553882 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 A0A0G2JS52 829 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■■□□□ 12.2
ACTN1-211ENST00000553882 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-211ENST00000553882 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 MYH7P12883 1935 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-211ENST00000553882 PDE6AP16499 860 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 ZRSR1Q15695 479 aaKnown RBP16.94■□□□□ 0.3
ACTN1-211ENST00000553882 LRRC8AQ8IWT6 810 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 MRFAP1L1Q96HT8 127 aa16.94■□□□□ 0.3
ACTN1-211ENST00000553882 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-211ENST00000553882 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 NEDD4P46934 1319 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 YEATS4O95619 227 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 TNNT1P13805 278 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 CDC27P30260 824 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 CDC25BP30305 580 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-211ENST00000553882 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 ALG1Q9BT22 464 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 KIAA1468Q9P260 1216 aa16.93■□□□□ 0.3
ACTN1-211ENST00000553882 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-211ENST00000553882 NAT10Q9H0A0 1025 aaKnown RBP16.92■□□□□ 0.3
ACTN1-211ENST00000553882 USP27XA6NNY8 438 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 ZNF202O95125 648 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
ACTN1-211ENST00000553882 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
ACTN1-211ENST00000553882 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-211ENST00000553882 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-211ENST00000553882 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 PDE8AO60658 829 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 SKILP12757 684 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 PFKFB1P16118 471 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 GNL2Q13823 731 aaKnown RBP16.91■□□□□ 0.3
ACTN1-211ENST00000553882 UBE3CQ15386 1083 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
ACTN1-211ENST00000553882 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
ACTN1-211ENST00000553882 CTDSPL2Q05D32 466 aa16.9■□□□□ 0.3
ACTN1-211ENST00000553882 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-211ENST00000553882 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
ACTN1-211ENST00000553882 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms