RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CREB3L3Q68CJ9 461 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 MIGA2Q7L4E1 593 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 LCORLQ8N3X6 602 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 CRNKL1Q9BZJ0 848 aaKnown RBP9.68□□□□□ -0.86
CHPT1-208ENST00000552215 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 SPTY2D1Q68D10 685 aaPredicted RBP9.68□□□□□ -0.86
CHPT1-208ENST00000552215 TBC1D2Q9BYX2 928 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 RNF181Q9P0P0 153 aa9.68□□□□□ -0.86
CHPT1-208ENST00000552215 NHSL1Q5SYE7 1610 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 SGSM2O43147 1006 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CIAO1O76071 339 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 MECOMQ03112 1051 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
CHPT1-208ENST00000552215 MFSD6Q6ZSS7 791 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 MTFR1LQ9H019 292 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CCDC171Q6TFL3 1326 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 LDHCP07864 332 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CYP2D6P10635 497 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 PSMA5P28066 241 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 BTDP43251 543 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CTNNA3Q9UI47 895 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 CCDC69A6NI79 296 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 ECE2O60344 883 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 HOMER1Q86YM7 354 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 NEK1Q96PY6 1258 aa9.67□□□□□ -0.86
CHPT1-208ENST00000552215 NCOA5Q9HCD5 579 aaKnown RBP9.67□□□□□ -0.86
CHPT1-208ENST00000552215 GOLGA6L4A6NEF3 574 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 APOBRQ0VD83 1088 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 APPBP2Q92624 585 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 TDRD3Q9H7E2 651 aaKnown RBP9.66□□□□□ -0.86
CHPT1-208ENST00000552215 FGAP02671 866 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 TM4SF1P30408 202 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 WDR66Q8TBY9 1149 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 SLC3A2P08195 630 aaKnown RBP9.66□□□□□ -0.86
CHPT1-208ENST00000552215 MKRN3Q13064 507 aaKnown RBP9.66□□□□□ -0.86
CHPT1-208ENST00000552215 DLGAP5Q15398 846 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 TRMT1LQ7Z2T5 733 aaKnown RBP9.66□□□□□ -0.86
CHPT1-208ENST00000552215 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 UIMC1Q96RL1 719 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
CHPT1-208ENST00000552215 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
CHPT1-208ENST00000552215 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
CHPT1-208ENST00000552215 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
CHPT1-208ENST00000552215 RABEP1Q15276 862 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 GRIK5Q16478 980 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 SLC44A5Q8NCS7 719 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 LEMD3Q9Y2U8 911 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 TAF6LQ9Y6J9 622 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 WDR78Q5VTH9 848 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 Q6ZUG5 572 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 MAST3O60307 1309 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 GOLGA8BA8MQT2 603 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 SMIM22K7EJ46 135 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 ATP6V0A2Q9Y487 856 aa9.65□□□□□ -0.86
CHPT1-208ENST00000552215 CTDP1Q9Y5B0 961 aaPredicted RBP9.65□□□□□ -0.86
CHPT1-208ENST00000552215 MYO1BO43795 1136 aa9.65□□□□□ -0.87
CHPT1-208ENST00000552215 CCDC96Q2M329 555 aa9.65□□□□□ -0.87
CHPT1-208ENST00000552215 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.87
CHPT1-208ENST00000552215 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.87
CHPT1-208ENST00000552215 SLC27A2O14975 620 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 FEZ1Q99689 392 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 MRC1P22897 1456 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
CHPT1-208ENST00000552215 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 ZFYP08048 801 aaPredicted RBP9.64□□□□□ -0.87
CHPT1-208ENST00000552215 TSPY3P0CV98 308 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 TSPY8P0CW00 308 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
CHPT1-208ENST00000552215 PLA2G12BQ9BX93 195 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 FZD1Q9UP38 647 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 UTYO14607 1347 aa9.64□□□□□ -0.87
CHPT1-208ENST00000552215 PRC1O43663 620 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 TEKT1Q969V4 418 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 SNX14Q9Y5W7 946 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 K7ELQ4 463 aaPredicted RBP9.63□□□□□ -0.87
CHPT1-208ENST00000552215 AK2P54819 239 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 LMO7Q8WWI1 1683 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 GOLGA6L22H0YM25 854 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 CPLX2Q6PUV4 134 aaKnown RBP9.63□□□□□ -0.87
CHPT1-208ENST00000552215 IFNL3Q8IZI9 196 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
CHPT1-208ENST00000552215 GSTO1P78417 241 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
CHPT1-208ENST00000552215 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms