RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 LRRC24Q50LG9 513 aa13□□□□□ -0.33
CCDC38-207ENST00000549752 MFSD14BQ5SR56 506 aa13□□□□□ -0.33
CCDC38-207ENST00000549752 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
CCDC38-207ENST00000549752 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC38-207ENST00000549752 LBX1P52954 281 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-207ENST00000549752 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-207ENST00000549752 SERPINA10Q9UK55 444 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 MYH2Q9UKX2 1941 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 LAMB1P07942 1786 aa12.99□□□□□ -0.33
CCDC38-207ENST00000549752 MAST3O60307 1309 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 LPIN2Q92539 896 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 GNL3LQ9NVN8 582 aaKnown RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
CCDC38-207ENST00000549752 LRRFIP2Q9Y608 721 aaKnown RBP12.98□□□□□ -0.33
CCDC38-207ENST00000549752 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 SLC10A3P09131 477 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 IL15P40933 162 aaPredicted RBP12.97□□□□□ -0.33
CCDC38-207ENST00000549752 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
CCDC38-207ENST00000549752 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 DEFB129Q9H1M3 183 aa12.97□□□□□ -0.33
CCDC38-207ENST00000549752 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 FAM155AB1AL88 458 aaPredicted RBP12.96□□□□□ -0.33
CCDC38-207ENST00000549752 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
CCDC38-207ENST00000549752 TRIM27P14373 513 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 FGFR2P21802 821 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 TNNI2P48788 182 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 MEIS3Q99687 375 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 SAGE1Q9NXZ1 904 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
CCDC38-207ENST00000549752 GNAI2P04899 355 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
CCDC38-207ENST00000549752 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
CCDC38-207ENST00000549752 MRIQ9BWK5 157 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 SIL1Q9H173 461 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 VEZTQ9HBM0 779 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 AKAP2Q9Y2D5 859 aa12.95□□□□□ -0.34
CCDC38-207ENST00000549752 OTOFQ9HC10 1997 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 SEMA3EO15041 775 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 BCAR3O75815 825 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 CRKP46108 304 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 BCAMP50895 628 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 KIF23Q02241 960 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-207ENST00000549752 MTX1Q13505 466 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 ATG9AQ7Z3C6 839 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
CCDC38-207ENST00000549752 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
CCDC38-207ENST00000549752 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
CCDC38-207ENST00000549752 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-207ENST00000549752 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
CCDC38-207ENST00000549752 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
CCDC38-207ENST00000549752 DZIP1LQ8IYY4 767 aaKnown RBP12.93□□□□□ -0.34
CCDC38-207ENST00000549752 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
CCDC38-207ENST00000549752 ANGEL1Q9UNK9 670 aaKnown RBP12.93□□□□□ -0.34
CCDC38-207ENST00000549752 IREB2P48200 963 aaKnown RBP12.92□□□□□ -0.34
CCDC38-207ENST00000549752 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 HOOK2Q96ED9 719 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 ZNF70Q9UC06 446 aaPredicted RBP12.92□□□□□ -0.34
CCDC38-207ENST00000549752 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
CCDC38-207ENST00000549752 MS4A1P11836 297 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 RASA3Q14644 834 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
CCDC38-207ENST00000549752 TDRD3Q9H7E2 651 aaKnown RBP12.91□□□□□ -0.34
CCDC38-207ENST00000549752 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
CCDC38-207ENST00000549752 INHBEP58166 350 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC38-207ENST00000549752 PRKG1Q13976 671 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms