RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PLCL1Q15111 1095 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 ATG4DQ86TL0 474 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 GATA6Q92908 595 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 CHRDQ9H2X0 955 aa5.17□□□□□ -1.58
DEPDC4-204ENST00000547823 FAM170BA6NMN3 283 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 DNM1Q05193 864 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 C8orf34Q49A92 452 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 CYP27C1Q4G0S4 372 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 CAPN12Q6ZSI9 719 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 ASAP3Q8TDY4 903 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 HHIPQ96QV1 700 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 ZC3H7BQ9UGR2 993 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 SYNGAP1Q96PV0 1343 aa5.16□□□□□ -1.58
DEPDC4-204ENST00000547823 DRD2P14416 443 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 COL19A1Q14993 1142 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 FBLN7Q53RD9 439 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 TMEM164Q5U3C3 297 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 HGSNATQ68CP4 663 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 BHLHE22Q8NFJ8 381 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 BCL7CQ8WUZ0 217 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 SLC38A3Q99624 504 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 LRRC4CQ9HCJ2 640 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 ACTL7BQ9Y614 415 aa5.15□□□□□ -1.59
DEPDC4-204ENST00000547823 RAB6AP20340 208 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 ATP2B4P23634 1241 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 ZNF792Q3KQV3 632 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 ZNF765Q7L2R6 523 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 ATCAYQ86WG3 371 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 TMEM40Q8WWA1 233 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 NRSN2Q9GZP1 204 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 SEMA6CQ9H3T2 930 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 ACSS3Q9H6R3 686 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 AMOTL2Q9Y2J4 779 aa5.14□□□□□ -1.59
DEPDC4-204ENST00000547823 TNFRSF21O75509 655 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 TRPA1O75762 1119 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 DLGAP3O95886 979 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 NFICP08651 508 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 TMEM132AQ24JP5 1023 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 OGFOD3Q6PK18 319 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 KSR1Q8IVT5 923 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 CLEC4MQ9H2X3 399 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 GGNBP2Q9H3C7 697 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 GSX1Q9H4S2 264 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 RAD18Q9NS91 495 aa5.13□□□□□ -1.59
DEPDC4-204ENST00000547823 EREGO14944 169 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 FUT4P22083 530 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 EIF1AXP47813 144 aaKnown RBP5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 POU4F3Q15319 338 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 ZNF648Q5T619 568 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 DYMQ7RTS9 669 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 SHISA5Q8N114 240 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 CORO1BQ9BR76 489 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 MKNK2Q9HBH9 465 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 ZNF777Q9ULD5 760 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 AP4E1Q9UPM8 1137 aa5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-204ENST00000547823 MAOBP27338 520 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 ASPAP45381 313 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 SRPK2P78362 688 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 PCDH1Q08174 1060 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 SEZ6L2Q6UXD5 910 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 NETO1Q8TDF5 533 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 FAM168AQ92567 244 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 RC3H2Q9HBD1 1191 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 SEPT3Q9UH03 358 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 VAV3Q9UKW4 847 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 MTMR7Q9Y216 660 aa5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
DEPDC4-204ENST00000547823 A0A096LPE4 126 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 A0A1W2PPZ6 126 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 AKAP4Q5JQC9 854 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 SPOCD1Q6ZMY3 1216 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 PBXIP1Q96AQ6 731 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 C1GALT1Q9NS00 363 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 FAM105AQ9NUU6 356 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 FAM53CQ9NYF3 392 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 POLIQ9UNA4 740 aa5.1□□□□□ -1.59
DEPDC4-204ENST00000547823 CARMIL2Q6F5E8 1435 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 FAM13AO94988 1023 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 MPSTP25325 297 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 PRKCQQ04759 706 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 AP3B2Q13367 1082 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 AAMPQ13685 434 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 PEAR1Q5VY43 1037 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 CCNJLQ8IV13 435 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 GLIS3Q8NEA6 775 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 FAM84AQ96KN4 292 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 DAGLAQ9Y4D2 1042 aa5.09□□□□□ -1.59
DEPDC4-204ENST00000547823 A6NHS1 94 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 B3GALT4O96024 378 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 NEFLP07196 543 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 NPR3P17342 541 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 IFI16Q16666 785 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 TOX2Q96NM4 488 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 PPP1R16BQ96T49 567 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 ATXN3LQ9H3M9 355 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms