RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 HAUS7Q99871 368 aa12.52□□□□□ -0.4
LINC00939-203ENST00000545784 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
LINC00939-203ENST00000545784 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
LINC00939-203ENST00000545784 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
LINC00939-203ENST00000545784 BOLA2Q9H3K6 86 aa12.52□□□□□ -0.41
LINC00939-203ENST00000545784 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
LINC00939-203ENST00000545784 TRAK2O60296 914 aa12.51□□□□□ -0.41
LINC00939-203ENST00000545784 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
LINC00939-203ENST00000545784 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
LINC00939-203ENST00000545784 PIH1D3Q9NQM4 214 aaKnown RBP12.51□□□□□ -0.41
LINC00939-203ENST00000545784 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
LINC00939-203ENST00000545784 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
LINC00939-203ENST00000545784 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
LINC00939-203ENST00000545784 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
LINC00939-203ENST00000545784 EPS15P42566 896 aa12.5□□□□□ -0.41
LINC00939-203ENST00000545784 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
LINC00939-203ENST00000545784 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
LINC00939-203ENST00000545784 CNOT7Q9UIV1 285 aaKnown RBP12.5□□□□□ -0.41
LINC00939-203ENST00000545784 SUGT1Q9Y2Z0 365 aa12.5□□□□□ -0.41
LINC00939-203ENST00000545784 YY1P25490 414 aa12.5□□□□□ -0.41
LINC00939-203ENST00000545784 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
LINC00939-203ENST00000545784 EDC3Q96F86 508 aaKnown RBP12.5□□□□□ -0.41
LINC00939-203ENST00000545784 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
LINC00939-203ENST00000545784 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
LINC00939-203ENST00000545784 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00939-203ENST00000545784 PRDX5P30044 214 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 AKAP11Q9UKA4 1901 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 PSME4Q14997 1843 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 AOX1Q06278 1338 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 EGFRP00533 1210 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 DDIT3P35638 169 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
LINC00939-203ENST00000545784 F8W031 263 aaPredicted RBP12.48□□□□□ -0.41
LINC00939-203ENST00000545784 GOLIM4O00461 696 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 ERC2O15083 957 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 MMP14P50281 582 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
LINC00939-203ENST00000545784 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
LINC00939-203ENST00000545784 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
LINC00939-203ENST00000545784 NMRK2Q9NPI5 230 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
LINC00939-203ENST00000545784 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 CLCN1P35523 988 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 HDLBPQ00341 1268 aaKnown RBP12.47□□□□□ -0.41
LINC00939-203ENST00000545784 MECOMQ03112 1051 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 SERPINA10Q9UK55 444 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
LINC00939-203ENST00000545784 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 H7C1D1 291 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 IGSF3O75054 1194 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
LINC00939-203ENST00000545784 EPHX2P34913 555 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
LINC00939-203ENST00000545784 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
LINC00939-203ENST00000545784 MTMR14Q8NCE2 650 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
LINC00939-203ENST00000545784 MYOZ2Q9NPC6 264 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 ADARB2Q9NS39 739 aaKnown RBP12.46□□□□□ -0.41
LINC00939-203ENST00000545784 LRP2BPQ9P2M1 347 aa12.46□□□□□ -0.41
LINC00939-203ENST00000545784 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.42
LINC00939-203ENST00000545784 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.42
LINC00939-203ENST00000545784 HHIPL2Q6UWX4 724 aa12.46□□□□□ -0.42
LINC00939-203ENST00000545784 OGFOD1Q8N543 542 aa12.46□□□□□ -0.42
LINC00939-203ENST00000545784 CRKP46108 304 aa12.45□□□□□ -0.42
LINC00939-203ENST00000545784 CFAP100Q494V2 611 aa12.45□□□□□ -0.42
LINC00939-203ENST00000545784 TBC1D10BQ4KMP7 808 aaPredicted RBP12.45□□□□□ -0.42
LINC00939-203ENST00000545784 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
LINC00939-203ENST00000545784 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
LINC00939-203ENST00000545784 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
LINC00939-203ENST00000545784 TCRBV5S4A2TA0A5A2 114 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 GSPT1P15170 499 aaKnown RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 USP50Q70EL3 339 aaPredicted RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 KBTBD3Q8NAB2 608 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 UBE2Q2Q8WVN8 375 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 PRMT6Q96LA8 375 aaPredicted RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
LINC00939-203ENST00000545784 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
LINC00939-203ENST00000545784 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms