RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	KLRG2	A4D1S0	409 aa	Predicted RBP	13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	GLTPD2	A6NH11	291 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	NPR1	P16066	1061 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	APLP1	P51693	650 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	UBE2H	P62256	183 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	METTL24	Q5JXM2	366 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	LDHAL6A	Q6ZMR3	332 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695		Q6ZUG5	572 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	DHX32	Q7L7V1	743 aa	Known RBP	13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	CHMP4C	Q96CF2	233 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	LLPH	Q9BRT6	129 aa	Known RBP	13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	NYX	Q9GZU5	481 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	GREM2	Q9H772	168 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	TRMT112	Q9UI30	125 aa	Known RBP	13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	CTNNA3	Q9UI47	895 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	UBN2	Q6ZU65	1347 aa		13.31	□□□□□ -0.28
LDHA-222	ENST00000543695	CEP350	Q5VT06	3117 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695		M0R2C6	588 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	GADD45B	O75293	160 aa	Predicted RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	LETM1	O95202	739 aa	Predicted RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	CHGB	P05060	677 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	HSPD1	P10809	573 aa	Known RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	PRELP	P51888	382 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	EXOSC10	Q01780	885 aa	Known RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	COL9A3	Q14050	684 aa	Predicted RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	ERFE	Q4G0M1	354 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	PARP10	Q53GL7	1025 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	LARP1B	Q659C4	914 aa	Known RBP	13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	ZSCAN25	Q6NSZ9	544 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	STOX1	Q6ZVD7	989 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	VGLL2	Q8N8G2	317 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	APPBP2	Q92624	585 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	AGXT2	Q9BYV1	514 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	TAOK3	Q9H2K8	898 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	CNNM1	Q9NRU3	951 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	RTL9	Q8NET4	1388 aa		13.3	□□□□□ -0.28
LDHA-222	ENST00000543695	SYCE3	A1L190	88 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	VPS37C	A5D8V6	355 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	PFKFB2	O60825	505 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	HSP90B1	P14625	803 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	VEGFA	P15692	232 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	ALDH1B1	P30837	517 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	C1QBP	Q07021	282 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	FSTL1	Q12841	308 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	TTF1	Q15361	905 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	CCDC183	Q5T5S1	534 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	SYNE4	Q8N205	404 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	FBXL16	Q8N461	479 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	TCEANC2	Q96MN5	208 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	RBSN	Q9H1K0	784 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695	MROH5	Q6ZUA9	1318 aa		13.29	□□□□□ -0.28
LDHA-222	ENST00000543695		E7EWF7	191 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	UQCRFS1P1	P0C7P4	283 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	ZAP70	P43403	619 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	SMARCC2	Q8TAQ2	1214 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	OSBP2	Q969R2	916 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	TSPY26P	Q9H489	355 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	GDPD2	Q9HCC8	539 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	RTN4	Q9NQC3	1192 aa	Known RBP	13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	MYH13	Q9UKX3	1938 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	ELP1	O95163	1332 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	LTBP3	Q9NS15	1303 aa		13.28	□□□□□ -0.28
LDHA-222	ENST00000543695	TIAM2	Q8IVF5	1701 aa		13.27	□□□□□ -0.28
LDHA-222	ENST00000543695	PDE8B	O95263	885 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	ARID4A	P29374	1257 aa	Predicted RBP	13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	KRT85	P78386	507 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	CCDC93	Q567U6	631 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	C7orf43	Q8WVR3	580 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	WDR19	Q8NEZ3	1342 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	ECM29	Q5VYK3	1845 aa		13.27	□□□□□ -0.29
LDHA-222	ENST00000543695	FIBP	O43427	364 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	FGFR2	P21802	821 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	ADD2	P35612	726 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	MCAM	P43121	646 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	HMGN5	P82970	282 aa	Known RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	DNM1	Q05193	864 aa	Known RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	SCARF1	Q14162	830 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	PUM3	Q15397	648 aa	Known RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	IMMT	Q16891	758 aa	Known RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	SLFNL1	Q499Z3	407 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	CDC37L1	Q7L3B6	337 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	RTKN2	Q8IZC4	609 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	SMC1B	Q8NDV3	1235 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	BRF1	Q92994	677 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	TRIM44	Q96DX7	344 aa	Predicted RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	ZNF274	Q96GC6	653 aa	Predicted RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	UTP14A	Q9BVJ6	771 aa	Known RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	KIF3A	Q9Y496	699 aa		13.26	□□□□□ -0.29
LDHA-222	ENST00000543695	SLC5A1	P13866	664 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	EVC	P57679	992 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	FGD1	P98174	961 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	STK3	Q13188	491 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	UBE3C	Q15386	1083 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	WASHC4	Q2M389	1173 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms