RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ERC2O15083 957 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 RFX5P48382 616 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-217ENST00000543537 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 KIAA0825Q8IV33 1275 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 PLEKHM2Q8IWE5 1019 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 TNS4Q8IZW8 715 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 CCDC102AQ96A19 550 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-217ENST00000543537 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-217ENST00000543537 PAPPA2Q9BXP8 1791 aa13.98□□□□□ -0.17
COPS7A-217ENST00000543537 COL1A1P02452 1464 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-217ENST00000543537 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
COPS7A-217ENST00000543537 AOC2O75106 756 aa13.97□□□□□ -0.17
COPS7A-217ENST00000543537 CDC45O75419 566 aa13.97□□□□□ -0.17
COPS7A-217ENST00000543537 PDE8BO95263 885 aa13.97□□□□□ -0.17
COPS7A-217ENST00000543537 HIBADHP31937 336 aaKnown RBP13.97□□□□□ -0.17
COPS7A-217ENST00000543537 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-217ENST00000543537 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-217ENST00000543537 APOBEC3FQ8IUX4 373 aaKnown RBP13.97□□□□□ -0.17
COPS7A-217ENST00000543537 IPO9Q96P70 1041 aaKnown RBP13.97□□□□□ -0.17
COPS7A-217ENST00000543537 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
COPS7A-217ENST00000543537 PNMA6EA0A0J9YXQ4 647 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 ZBTB22O15209 634 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 FGFR2P21802 821 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 LBX1P52954 281 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
COPS7A-217ENST00000543537 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 TTC22Q5TAA0 569 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 RHPN1Q8TCX5 695 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 FBXW7Q969H0 707 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 BEGAINQ9BUH8 593 aa13.96□□□□□ -0.17
COPS7A-217ENST00000543537 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
COPS7A-217ENST00000543537 SLC10A3P09131 477 aa13.95□□□□□ -0.18
COPS7A-217ENST00000543537 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
COPS7A-217ENST00000543537 PDE1AP54750 535 aa13.95□□□□□ -0.18
COPS7A-217ENST00000543537 PPP2R3BQ9Y5P8 575 aa13.95□□□□□ -0.18
COPS7A-217ENST00000543537 EYA2O00167 538 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 REC8O95072 547 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 MX1P20591 662 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 GYG1P46976 350 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 BECN1Q14457 450 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
COPS7A-217ENST00000543537 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
COPS7A-217ENST00000543537 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
COPS7A-217ENST00000543537 CIAO1O76071 339 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 ZNF157P51786 506 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-217ENST00000543537 GRM1Q13255 1194 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
COPS7A-217ENST00000543537 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 SUGT1Q9Y2Z0 365 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
COPS7A-217ENST00000543537 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 HIP1O00291 1037 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
COPS7A-217ENST00000543537 NF2P35240 595 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 HDLBPQ00341 1268 aaKnown RBP13.92□□□□□ -0.18
COPS7A-217ENST00000543537 MAP3K11Q16584 847 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 RASAL3Q86YV0 1011 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 LPIN2Q92539 896 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 PRMT6Q96LA8 375 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-217ENST00000543537 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
COPS7A-217ENST00000543537 MYO1BO43795 1136 aa13.91□□□□□ -0.18
COPS7A-217ENST00000543537 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
COPS7A-217ENST00000543537 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
COPS7A-217ENST00000543537 LDLRAD1Q5T700 205 aa13.91□□□□□ -0.18
COPS7A-217ENST00000543537 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
COPS7A-217ENST00000543537 PRAMEF18Q5VWM3 479 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 SCAF8Q9UPN6 1271 aaKnown RBP13.9□□□□□ -0.18
COPS7A-217ENST00000543537 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
COPS7A-217ENST00000543537 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
COPS7A-217ENST00000543537 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
COPS7A-217ENST00000543537 BCAMP50895 628 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 LRRFIP1Q32MZ4 808 aaKnown RBP13.89□□□□□ -0.19
COPS7A-217ENST00000543537 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
COPS7A-217ENST00000543537 JAG2Q9Y219 1238 aa13.89□□□□□ -0.19
COPS7A-217ENST00000543537 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
COPS7A-217ENST00000543537 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
COPS7A-217ENST00000543537 SLC5A1P13866 664 aa13.88□□□□□ -0.19
COPS7A-217ENST00000543537 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms