RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 PUM3Q15397 648 aaKnown RBP9.61□□□□□ -0.87
NECAP1-205ENST00000541948 DLGAP5Q15398 846 aa9.61□□□□□ -0.87
NECAP1-205ENST00000541948 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
NECAP1-205ENST00000541948 C2orf69Q8N8R5 385 aa9.61□□□□□ -0.87
NECAP1-205ENST00000541948 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
NECAP1-205ENST00000541948 SAGE1Q9NXZ1 904 aa9.61□□□□□ -0.87
NECAP1-205ENST00000541948 TTF2Q9UNY4 1162 aaKnown RBP9.61□□□□□ -0.87
NECAP1-205ENST00000541948 PHKA1P46020 1223 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 CACNB3P54284 484 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 TIMM10P62072 90 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 PRKG1Q13976 671 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 NBPF12Q5TAG4 269 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-205ENST00000541948 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 DEFB129Q9H1M3 183 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
NECAP1-205ENST00000541948 CASP8AP2Q9UKL3 1982 aa9.6□□□□□ -0.87
NECAP1-205ENST00000541948 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-205ENST00000541948 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 CRKP46108 304 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 ZNF157P51786 506 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-205ENST00000541948 TFCP2Q12800 502 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 ATP2B3Q16720 1220 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 LDLRAD1Q5T700 205 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 ZKSCAN2Q63HK3 967 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
NECAP1-205ENST00000541948 LPIN2Q92539 896 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 CLMNQ96JQ2 1002 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 ZNF70Q9UC06 446 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-205ENST00000541948 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
NECAP1-205ENST00000541948 MYO5AQ9Y4I1 1855 aaKnown RBP9.58□□□□□ -0.88
NECAP1-205ENST00000541948 PRDX5P30044 214 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 GJA5P36382 358 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 POLA2Q14181 598 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 RASA3Q14644 834 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 APOBEC3HQ6NTF7 200 aaKnown RBP9.58□□□□□ -0.88
NECAP1-205ENST00000541948 APOBEC3FQ8IUX4 373 aaKnown RBP9.58□□□□□ -0.88
NECAP1-205ENST00000541948 PANK1Q8TE04 598 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 VEZTQ9HBM0 779 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 RNF186Q9NXI6 227 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 SERPINA10Q9UK55 444 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 FBXO3Q9UK99 471 aa9.58□□□□□ -0.88
NECAP1-205ENST00000541948 A0A1B0GUL7 405 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 UNCXA6NJT0 531 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 USP2O75604 605 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 GNAI3P08754 354 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 IFIT1P09914 478 aaKnown RBP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 SLC5A1P13866 664 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 IL15P40933 162 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 RBM5P52756 815 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 MAP3K11Q16584 847 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 CAVIN4Q5BKX8 364 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 PI16Q6UXB8 463 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 R3HDMLQ9H3Y0 253 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
NECAP1-205ENST00000541948 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
NECAP1-205ENST00000541948 MYH2Q9UKX2 1941 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 TCP10L2B9ZVM9 353 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 IPO8O15397 1037 aaKnown RBP9.56□□□□□ -0.88
NECAP1-205ENST00000541948 GNAI2P04899 355 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 SLURP2P0DP57 97 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 NF2P35240 595 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 RGS19P49795 217 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 VPS37DQ86XT2 251 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 XAGE2Q96GT9 111 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 ABHD8Q96I13 439 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 ZDHHC15Q96MV8 337 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 TMEM39BQ9GZU3 492 aa9.56□□□□□ -0.88
NECAP1-205ENST00000541948 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 ATP8B2P98198 1209 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
NECAP1-205ENST00000541948 NFIAQ12857 509 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 PKN2Q16513 984 aaKnown RBP9.55□□□□□ -0.88
NECAP1-205ENST00000541948 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
NECAP1-205ENST00000541948 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-205ENST00000541948 ZFPM1Q8IX07 1006 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 DAGLAQ9Y4D2 1042 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 SALL1Q9NSC2 1324 aa9.55□□□□□ -0.88
NECAP1-205ENST00000541948 TRPA1O75762 1119 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 CAP1Q01518 475 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 TTLL12Q14166 644 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-205ENST00000541948 C20orf194Q5TEA3 1177 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 HHIPL2Q6UWX4 724 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 SIRT2Q8IXJ6 389 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 TBC1D22AQ8WUA7 517 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 TEKT1Q969V4 418 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 MRIQ9BWK5 157 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
NECAP1-205ENST00000541948 HMG20BQ9P0W2 317 aa9.54□□□□□ -0.88
NECAP1-205ENST00000541948 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms