RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 AKAP11Q9UKA4 1901 aa22.88■■□□□ 1.25
VPS33A-205ENST00000541169 ERC2O15083 957 aa22.88■■□□□ 1.25
VPS33A-205ENST00000541169 SMARCA5O60264 1052 aaPredicted RBP22.88■■□□□ 1.25
VPS33A-205ENST00000541169 RBM26Q5T8P6 1007 aaKnown RBP22.88■■□□□ 1.25
VPS33A-205ENST00000541169 DZIP1Q86YF9 867 aaKnown RBP22.88■■□□□ 1.25
VPS33A-205ENST00000541169 DCPSQ96C86 337 aaKnown RBP22.88■■□□□ 1.25
VPS33A-205ENST00000541169 F8W031 263 aaPredicted RBP22.87■■□□□ 1.25
VPS33A-205ENST00000541169 LDHCP07864 332 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 RBM5P52756 815 aaKnown RBP eCLIP22.87■■□□□ 1.25
VPS33A-205ENST00000541169 NUCB1Q02818 461 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 CFAP100Q494V2 611 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 TRPM4Q8TD43 1214 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 ZBED3Q96IU2 234 aaPredicted RBP22.87■■□□□ 1.25
VPS33A-205ENST00000541169 ZDHHC15Q96MV8 337 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 LRP2BPQ9P2M1 347 aa22.87■■□□□ 1.25
VPS33A-205ENST00000541169 SHTN1A0MZ66 631 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 SPDYE2BA6NHP3 402 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 WNT10BO00744 389 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 SPDYE6P0CI01 402 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 CRKP46108 304 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 HIRAP54198 1017 aaPredicted RBP22.86■■□□□ 1.25
VPS33A-205ENST00000541169 SCARF1Q14162 830 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 CDC37L1Q7L3B6 337 aa22.86■■□□□ 1.25
VPS33A-205ENST00000541169 FAM163AQ96GL9 167 aaPredicted RBP22.86■■□□□ 1.25
VPS33A-205ENST00000541169 MAP4K4O95819 1239 aaPredicted RBP22.85■■□□□ 1.25
VPS33A-205ENST00000541169 PRDX5P30044 214 aa22.85■■□□□ 1.25
VPS33A-205ENST00000541169 CHD1LQ86WJ1 897 aa22.85■■□□□ 1.25
VPS33A-205ENST00000541169 ECM29Q5VYK3 1845 aa22.85■■□□□ 1.25
VPS33A-205ENST00000541169 CYP2E1P05181 493 aaPredicted RBP22.84■■□□□ 1.25
VPS33A-205ENST00000541169 MX1P20591 662 aa22.84■■□□□ 1.25
VPS33A-205ENST00000541169 ZAP70P43403 619 aa22.84■■□□□ 1.25
VPS33A-205ENST00000541169 APOBEC3FQ8IUX4 373 aaKnown RBP22.84■■□□□ 1.25
VPS33A-205ENST00000541169 CNTROBQ8N137 903 aa22.84■■□□□ 1.25
VPS33A-205ENST00000541169 HAUS7Q99871 368 aa22.84■■□□□ 1.25
VPS33A-205ENST00000541169 BCL11AQ9H165 835 aa22.84■■□□□ 1.25
VPS33A-205ENST00000541169 GLRX3O76003 335 aaKnown RBP22.83■■□□□ 1.25
VPS33A-205ENST00000541169 EGFRP00533 1210 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 MAP3K12Q12852 859 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 TNFAIP1Q13829 316 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 PI16Q6UXB8 463 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 CERS3Q8IU89 383 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 SULF1Q8IWU6 871 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 SNRKQ9NRH2 765 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 RAI14Q9P0K7 980 aa22.83■■□□□ 1.25
VPS33A-205ENST00000541169 POTEIP0CG38 1075 aa22.82■■□□□ 1.24
VPS33A-205ENST00000541169 POTEJP0CG39 1038 aa22.82■■□□□ 1.24
VPS33A-205ENST00000541169 GGA3Q9NZ52 723 aa22.82■■□□□ 1.24
VPS33A-205ENST00000541169 STAP2Q9UGK3 403 aa22.82■■□□□ 1.24
VPS33A-205ENST00000541169 AOX1Q06278 1338 aa22.82■■□□□ 1.24
VPS33A-205ENST00000541169 C1QTNF8P60827 252 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 MECOMQ03112 1051 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 GRIK5Q16478 980 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 LRRFIP1Q32MZ4 808 aaKnown RBP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 NBPF9Q3BBW0 867 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 FKBP1CQ5VVH2 108 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 CENPQQ7L2Z9 268 aaPredicted RBP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 NSUN4Q96CB9 384 aaKnown RBP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 PRMT6Q96LA8 375 aaPredicted RBP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 NOL10Q9BSC4 688 aaKnown RBP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.81■■□□□ 1.24
VPS33A-205ENST00000541169 PAG1Q9NWQ8 432 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 TMOD2Q9NZR1 351 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 PPP2R3BQ9Y5P8 575 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 MAST2Q6P0Q8 1798 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 GAKO14976 1311 aa22.81■■□□□ 1.24
VPS33A-205ENST00000541169 ANGEL2Q5VTE6 544 aaKnown RBP22.8■■□□□ 1.24
VPS33A-205ENST00000541169 MAP1SQ66K74 1059 aaPredicted RBP22.8■■□□□ 1.24
VPS33A-205ENST00000541169 B4GALNT3Q6L9W6 998 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 TBC1D9Q6ZT07 1266 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 KRT26Q7Z3Y9 468 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 TICAM2Q86XR7 235 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 LNPKQ9C0E8 428 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 BOLA2Q9H3K6 86 aa22.8■■□□□ 1.24
VPS33A-205ENST00000541169 MYH2Q9UKX2 1941 aa22.79■■□□□ 1.24
VPS33A-205ENST00000541169 ITGBL1O95965 494 aaPredicted RBP22.79■■□□□ 1.24
VPS33A-205ENST00000541169 SPDYE2Q495Y8 402 aa22.79■■□□□ 1.24
VPS33A-205ENST00000541169 NAA16Q6N069 864 aaPredicted RBP22.79■■□□□ 1.24
VPS33A-205ENST00000541169 ZSCAN25Q6NSZ9 544 aa22.79■■□□□ 1.24
VPS33A-205ENST00000541169 DNAJC2Q99543 621 aaKnown RBP22.79■■□□□ 1.24
VPS33A-205ENST00000541169 MROH7-TTC4A0A0A0MT08 1334 aa22.79■■□□□ 1.24
VPS33A-205ENST00000541169 SALL3Q9BXA9 1300 aa22.79■■□□□ 1.24
VPS33A-205ENST00000541169 DOCK2Q92608 1830 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 IDH1O75874 414 aaKnown RBP22.78■■□□□ 1.24
VPS33A-205ENST00000541169 BAG3O95817 575 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 PLCG2P16885 1265 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 TNNI2P48788 182 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 APOBEC3HQ6NTF7 200 aaKnown RBP22.78■■□□□ 1.24
VPS33A-205ENST00000541169 CCDC136Q96JN2 1154 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 DAGLAQ9Y4D2 1042 aa22.78■■□□□ 1.24
VPS33A-205ENST00000541169 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
VPS33A-205ENST00000541169 GOLIM4O00461 696 aa22.77■■□□□ 1.24
VPS33A-205ENST00000541169 PDE1AP54750 535 aa22.77■■□□□ 1.24
VPS33A-205ENST00000541169 OSBPL3Q9H4L5 887 aa22.77■■□□□ 1.24
VPS33A-205ENST00000541169 PIH1D3Q9NQM4 214 aaKnown RBP22.77■■□□□ 1.24
VPS33A-205ENST00000541169 ZNF70Q9UC06 446 aaPredicted RBP22.77■■□□□ 1.24
VPS33A-205ENST00000541169 PASKQ96RG2 1323 aa22.77■■□□□ 1.24
VPS33A-205ENST00000541169 DIXDC1Q155Q3 683 aa22.76■■□□□ 1.23
VPS33A-205ENST00000541169 FAM83AQ86UY5 434 aa22.75■■□□□ 1.23
VPS33A-205ENST00000541169 PI4K2BQ8TCG2 481 aa22.75■■□□□ 1.23
VPS33A-205ENST00000541169 TDRD3Q9H7E2 651 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms