RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FAM205AQ6ZU69 1335 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 HUNKP57058 714 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
CHD4-204ENST00000535810 ATG9AQ7Z3C6 839 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 FBXO33Q7Z6M2 555 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
CHD4-204ENST00000535810 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
CHD4-204ENST00000535810 AOC2O75106 756 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 CIAO1O76071 339 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 GNAI3P08754 354 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 FGFR2P21802 821 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 SIL1Q9H173 461 aa11.03□□□□□ -0.64
CHD4-204ENST00000535810 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
CHD4-204ENST00000535810 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
CHD4-204ENST00000535810 BCAMP50895 628 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 MTX1Q13505 466 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 LPIN2Q92539 896 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 COPRSQ9NQ92 184 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 IQSEC3Q9UPP2 1182 aaPredicted RBP11.02□□□□□ -0.65
CHD4-204ENST00000535810 PA2G4Q9UQ80 394 aaKnown RBP11.02□□□□□ -0.65
CHD4-204ENST00000535810 PCDHAC2Q9Y5I4 1007 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
CHD4-204ENST00000535810 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 SLC5A1P13866 664 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 IL15P40933 162 aaPredicted RBP11.01□□□□□ -0.65
CHD4-204ENST00000535810 FKBP1BP68106 108 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 DGKZQ13574 1117 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 CFAP100Q494V2 611 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
CHD4-204ENST00000535810 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
CHD4-204ENST00000535810 TMEM57Q8N5G2 664 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 AOX1Q06278 1338 aa11.01□□□□□ -0.65
CHD4-204ENST00000535810 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
CHD4-204ENST00000535810 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
CHD4-204ENST00000535810 GNAI2P04899 355 aa11□□□□□ -0.65
CHD4-204ENST00000535810 CHAF1AQ13111 956 aaPredicted RBP11□□□□□ -0.65
CHD4-204ENST00000535810 NOGQ13253 232 aa11□□□□□ -0.65
CHD4-204ENST00000535810 GRIK5Q16478 980 aa11□□□□□ -0.65
CHD4-204ENST00000535810 ATP2B3Q16720 1220 aa11□□□□□ -0.65
CHD4-204ENST00000535810 TBC1D22AQ8WUA7 517 aa11□□□□□ -0.65
CHD4-204ENST00000535810 PRMT6Q96LA8 375 aaPredicted RBP11□□□□□ -0.65
CHD4-204ENST00000535810 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
CHD4-204ENST00000535810 SERPINA10Q9UK55 444 aa11□□□□□ -0.65
CHD4-204ENST00000535810 TTF2Q9UNY4 1162 aaKnown RBP11□□□□□ -0.65
CHD4-204ENST00000535810 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
CHD4-204ENST00000535810 CLRN2A0PK11 232 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 MYO1BO43795 1136 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 FRAT2O75474 233 aaPredicted RBP10.99□□□□□ -0.65
CHD4-204ENST00000535810 ZNF157P51786 506 aaPredicted RBP10.99□□□□□ -0.65
CHD4-204ENST00000535810 RBM5P52756 815 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHD4-204ENST00000535810 MOB2Q70IA6 237 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
CHD4-204ENST00000535810 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 ZIC5Q96T25 663 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
CHD4-204ENST00000535810 MAP3K13O43283 966 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 SLC10A3P09131 477 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 RLBP1P12271 317 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 NF2P35240 595 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 CRKP46108 304 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 RASAL3Q86YV0 1011 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
CHD4-204ENST00000535810 PNMA6EA0A0J9YXQ4 647 aa10.97□□□□□ -0.65
CHD4-204ENST00000535810 ADORA1P30542 326 aa10.97□□□□□ -0.65
CHD4-204ENST00000535810 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
CHD4-204ENST00000535810 TTLL12Q14166 644 aaPredicted RBP10.97□□□□□ -0.65
CHD4-204ENST00000535810 ITPRIPQ8IWB1 547 aa10.97□□□□□ -0.65
CHD4-204ENST00000535810 DZIP1LQ8IYY4 767 aaKnown RBP10.97□□□□□ -0.65
CHD4-204ENST00000535810 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
CHD4-204ENST00000535810 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
CHD4-204ENST00000535810 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 UBE2Q2LH0YL09 131 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 PHKA1P46020 1223 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 TFCP2Q12800 502 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
CHD4-204ENST00000535810 RASA3Q14644 834 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 TEKT1Q969V4 418 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.65
CHD4-204ENST00000535810 C1orf115Q9H7X2 142 aa10.96□□□□□ -0.65
CHD4-204ENST00000535810 GNL3LQ9NVN8 582 aaKnown RBP10.96□□□□□ -0.65
CHD4-204ENST00000535810 ZNF70Q9UC06 446 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms