RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
CHRDL2-209ENST00000534276 COL1A1P02452 1464 aaPredicted RBP15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 CLRN2A0PK11 232 aa15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 CCDC85CA6NKD9 419 aa15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 MYO1BO43795 1136 aa15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 GNAI3P08754 354 aa15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 PPP2R3BQ9Y5P8 575 aa15.22■□□□□ 0.03
CHRDL2-209ENST00000534276 AOX1Q06278 1338 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 METTL24Q5JXM2 366 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 FBXO33Q7Z6M2 555 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 VGLL2Q8N8G2 317 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 ANGEL1Q9UNK9 670 aaKnown RBP15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
CHRDL2-209ENST00000534276 PDE8BO95263 885 aa15.2■□□□□ 0.02
CHRDL2-209ENST00000534276 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRDL2-209ENST00000534276 VEZTQ9HBM0 779 aa15.2■□□□□ 0.02
CHRDL2-209ENST00000534276 TTF2Q9UNY4 1162 aaKnown RBP15.2■□□□□ 0.02
CHRDL2-209ENST00000534276 FZD1Q9UP38 647 aa15.2■□□□□ 0.02
CHRDL2-209ENST00000534276 TM4SF4P48230 202 aa15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 VPS37DQ86XT2 251 aa15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 SERPINA10Q9UK55 444 aa15.19■□□□□ 0.02
CHRDL2-209ENST00000534276 PPP1R12BO60237 982 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 SPRYD7Q5W111 196 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 GCC1Q96CN9 775 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
CHRDL2-209ENST00000534276 GNAI2P04899 355 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 RASA3Q14644 834 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 GRIK5Q16478 980 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 SLC10A4Q96EP9 437 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 EYA2O00167 538 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 TBC1D8O95759 1140 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 FGFR2P21802 821 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 BCAMP50895 628 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 TBC1D22AQ8WUA7 517 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 MEIS3Q99687 375 aa15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
CHRDL2-209ENST00000534276 UNCXA6NJT0 531 aa15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 HMMRO75330 724 aa15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 CRKP46108 304 aa15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 TNFAIP1Q13829 316 aa15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 PUM3Q15397 648 aaKnown RBP15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 CLMNQ96JQ2 1002 aa15.16■□□□□ 0.02
CHRDL2-209ENST00000534276 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
CHRDL2-209ENST00000534276 RGS19P49795 217 aa15.15■□□□□ 0.02
CHRDL2-209ENST00000534276 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
CHRDL2-209ENST00000534276 USP2O75604 605 aaPredicted RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 ZBTB48P10074 688 aaPredicted RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 IREB2P48200 963 aaKnown RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 ATG9AQ7Z3C6 839 aa15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
CHRDL2-209ENST00000534276 MANSC4A6NHS7 340 aaPredicted RBP15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 TCP10L2B9ZVM9 353 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 GPR25O00155 361 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 SLC5A1P13866 664 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 INHBEP58166 350 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 SIRT2Q8IXJ6 389 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 LPIN2Q92539 896 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 MRIQ9BWK5 157 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 CFHR5Q9BXR6 569 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
CHRDL2-209ENST00000534276 CIAO1O76071 339 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 ALDH1A1P00352 501 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 ATP8B2P98198 1209 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 ANKRD13AQ8IZ07 590 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 TEKT1Q969V4 418 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 TMEM39BQ9GZU3 492 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 R3HDMLQ9H3Y0 253 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 SUGT1Q9Y2Z0 365 aa15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
CHRDL2-209ENST00000534276 TNNI2P48788 182 aa15.11■□□□□ 0.01
CHRDL2-209ENST00000534276 NUCB1Q02818 461 aa15.11■□□□□ 0.01
CHRDL2-209ENST00000534276 MLLT1Q03111 559 aaPredicted RBP15.11■□□□□ 0.01
CHRDL2-209ENST00000534276 IFNL1Q8IU54 200 aa15.11■□□□□ 0.01
CHRDL2-209ENST00000534276 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
CHRDL2-209ENST00000534276 SIL1Q9H173 461 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms