RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 EZH2Q15910 746 aaKnown RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 INTS3Q68E01 1043 aaKnown RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 INTS5Q6P9B9 1019 aaKnown RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 COPS6Q7L5N1 327 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 TMEM57Q8N5G2 664 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 NXF1Q9UBU9 619 aaKnown RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 N4BP2Q86UW6 1770 aaPredicted RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 ADCY9O60503 1353 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 F6X3S4 739 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 IL6STP40189 918 aaPredicted RBP7.75□□□□□ -1.17
CMTM1-220ENST00000534143 CRKLP46109 303 aaKnown RBP7.75□□□□□ -1.17
CMTM1-220ENST00000534143 KCNQ4P56696 695 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 FKBP5Q13451 457 aaPredicted RBP7.75□□□□□ -1.17
CMTM1-220ENST00000534143 MVPQ14764 893 aaKnown RBP7.75□□□□□ -1.17
CMTM1-220ENST00000534143 KSR2Q6VAB6 950 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
CMTM1-220ENST00000534143 LINC00116Q8NCU8 138 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 XAGE3Q8WTP9 111 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 ZNF592Q92610 1267 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 PRM3Q9NNZ6 103 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 CCDC87Q9NVE4 849 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 ZBTB1Q9Y2K1 713 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 CNTNAP4Q9C0A0 1308 aa7.75□□□□□ -1.17
CMTM1-220ENST00000534143 RGPD3A6NKT7 1758 aaPredicted RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 RGPD4Q7Z3J3 1758 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 PI4KAP2A4QPH2 592 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 SOBPA7XYQ1 873 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 EIF5P55010 431 aaKnown RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 AIMP1Q12904 312 aaKnown RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 TTLL7Q6ZT98 887 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 NPAS3Q8IXF0 933 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 FTSJ3Q8IY81 847 aaKnown RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 PI4KAP1Q8N8J0 262 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 DNAAF4Q8WXU2 420 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 CCNL1Q9UK58 526 aaPredicted RBP7.74□□□□□ -1.17
CMTM1-220ENST00000534143 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 PXDNLA1KZ92 1463 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 ARFGEF2Q9Y6D5 1785 aa7.74□□□□□ -1.17
CMTM1-220ENST00000534143 SPINT1O43278 529 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 LILRA1O75019 489 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 RPS6KA4O75676 772 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 DDX58O95786 925 aaKnown RBP7.73□□□□□ -1.17
CMTM1-220ENST00000534143 APBA3O96018 575 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 CCT4P50991 539 aaKnown RBP7.73□□□□□ -1.17
CMTM1-220ENST00000534143 AAMPQ13685 434 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 TXNRD1Q16881 649 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 BEND3Q5T5X7 828 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 PLBD2Q8NHP8 589 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 DDX19BQ9UMR2 479 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 MAP3K2Q9Y2U5 619 aa7.73□□□□□ -1.17
CMTM1-220ENST00000534143 UTRNP46939 3433 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 IBTKQ9P2D0 1353 aaPredicted RBP7.72□□□□□ -1.17
CMTM1-220ENST00000534143 C4BP0C0L5 1744 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 ATP10DQ9P241 1426 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 MAN1A2O60476 641 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 ADD1P35611 737 aaKnown RBP7.72□□□□□ -1.17
CMTM1-220ENST00000534143 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 ITPRIPQ8IWB1 547 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 AGBL1Q96MI9 1066 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 CAMKK2Q96RR4 588 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 METTL22Q9BUU2 404 aaPredicted RBP7.72□□□□□ -1.17
CMTM1-220ENST00000534143 ZBTB40Q9NUA8 1239 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 NUP98P52948 1817 aa7.72□□□□□ -1.17
CMTM1-220ENST00000534143 UBR3Q6ZT12 1888 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 TTLL8A6PVC2 850 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 ERVV-1B6SEH8 477 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 ALDH1L1O75891 902 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 IGKV5-2P06315 115 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 HMGB2P26583 209 aaKnown RBP7.71□□□□□ -1.18
CMTM1-220ENST00000534143 IRF5Q13568 498 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 LINS1Q8NG48 757 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 SLC16A10Q8TF71 515 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 USP44Q9H0E7 712 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 CHMP4BQ9H444 224 aaKnown RBP7.71□□□□□ -1.18
CMTM1-220ENST00000534143 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 CASZ1Q86V15 1759 aa7.71□□□□□ -1.18
CMTM1-220ENST00000534143 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.18
CMTM1-220ENST00000534143 ANKRD36CQ5JPF3 1778 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 BCORQ6W2J9 1755 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 A0A087WZG4 1122 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 NEURL1BA8MQ27 555 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 ADH1AP07327 375 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 RELBQ01201 579 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 TRIM28Q13263 835 aaKnown RBP7.7□□□□□ -1.18
CMTM1-220ENST00000534143 TCIRG1Q13488 830 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 MCM6Q14566 821 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 HLFQ16534 295 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 LCE2CQ5TA81 110 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 AMIGO3Q86WK7 504 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 MEIS3Q99687 375 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms