RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 PRKAB2O43741 272 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 CTDSPL2Q05D32 466 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
USP35-204ENST00000530267 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 NR1I2O75469 434 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 GYG1P46976 350 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 LRP2BPQ9P2M1 347 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 LRP5O75197 1615 aa17.78■□□□□ 0.44
USP35-204ENST00000530267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.77■□□□□ 0.44
USP35-204ENST00000530267 CPLX1O14810 134 aa17.77■□□□□ 0.44
USP35-204ENST00000530267 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.44
USP35-204ENST00000530267 NUP62CLQ9H1M0 184 aa17.77■□□□□ 0.44
USP35-204ENST00000530267 ABCF2Q9UG63 623 aa17.77■□□□□ 0.44
USP35-204ENST00000530267 NEDD4P46934 1319 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 ZSCAN30Q86W11 494 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 ANKRD18AQ8IVF6 992 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.43
USP35-204ENST00000530267 FUCA2Q9BTY2 467 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 NAPBQ9H115 298 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 EPB41L4AQ9HCS5 686 aaPredicted RBP17.77■□□□□ 0.43
USP35-204ENST00000530267 BCL9LQ86UU0 1499 aa17.77■□□□□ 0.43
USP35-204ENST00000530267 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
USP35-204ENST00000530267 EVCP57679 992 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 ATRNO75882 1429 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 MSNP26038 577 aaKnown RBP17.76■□□□□ 0.43
USP35-204ENST00000530267 VPS72Q15906 364 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 CLEC4GQ6UXB4 293 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 FBXL16Q8N461 479 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 USP28Q96RU2 1077 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 TNMDQ9H2S6 317 aa17.76■□□□□ 0.43
USP35-204ENST00000530267 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
USP35-204ENST00000530267 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
USP35-204ENST00000530267 MAP3K11Q16584 847 aa17.75■□□□□ 0.43
USP35-204ENST00000530267 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
USP35-204ENST00000530267 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
USP35-204ENST00000530267 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
USP35-204ENST00000530267 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
USP35-204ENST00000530267 PATL2C9JE40 543 aaKnown RBP17.74■□□□□ 0.43
USP35-204ENST00000530267 GNPATO15228 680 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
USP35-204ENST00000530267 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
USP35-204ENST00000530267 CELF1Q92879 486 aaKnown RBP17.74■□□□□ 0.43
USP35-204ENST00000530267 ANGEL1Q9UNK9 670 aaKnown RBP17.74■□□□□ 0.43
USP35-204ENST00000530267 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 SLC4A4Q9Y6R1 1079 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 RREB1Q92766 1687 aa17.74■□□□□ 0.43
USP35-204ENST00000530267 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
USP35-204ENST00000530267 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 TDO2P48775 406 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
USP35-204ENST00000530267 USP21Q9UK80 565 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 TACC3Q9Y6A5 838 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 VPS37DQ86XT2 251 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 AIFM3Q96NN9 605 aa17.73■□□□□ 0.43
USP35-204ENST00000530267 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 RTL9Q8NET4 1388 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 COL5A3P25940 1745 aaPredicted RBP17.72■□□□□ 0.43
USP35-204ENST00000530267 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
USP35-204ENST00000530267 ADCY5O95622 1261 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 CYP7A1P22680 504 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 METAP2P50579 478 aaKnown RBP eCLIP17.72■□□□□ 0.43
USP35-204ENST00000530267 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
USP35-204ENST00000530267 PHKBQ93100 1093 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
USP35-204ENST00000530267 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 MINPP1Q9UNW1 487 aa17.72■□□□□ 0.43
USP35-204ENST00000530267 ZPR1O75312 459 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 ME1P48163 572 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 KLRK1P26718 216 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 CDC27P30260 824 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 TYRO3Q06418 890 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 TMEM67Q5HYA8 995 aa17.71■□□□□ 0.43
USP35-204ENST00000530267 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
USP35-204ENST00000530267 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
USP35-204ENST00000530267 NPHP1O15259 732 aa17.7■□□□□ 0.42
USP35-204ENST00000530267 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
USP35-204ENST00000530267 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
USP35-204ENST00000530267 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
USP35-204ENST00000530267 CLSTN2Q9H4D0 955 aa17.7■□□□□ 0.42
USP35-204ENST00000530267 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
USP35-204ENST00000530267 NOL7Q9UMY1 257 aaKnown RBP17.7■□□□□ 0.42
USP35-204ENST00000530267 IFIT3O14879 490 aaKnown RBP17.7■□□□□ 0.42
USP35-204ENST00000530267 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms