RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 FBXO46Q6PJ61 603 aaPredicted RBP23.78■■□□□ 1.4
PKP3-204ENST00000526971 ZNF804AQ7Z570 1209 aa23.78■■□□□ 1.4
PKP3-204ENST00000526971 WNK4Q96J92 1243 aa23.78■■□□□ 1.4
PKP3-204ENST00000526971 CENPFP49454 3210 aa23.77■■□□□ 1.4
PKP3-204ENST00000526971 EYA2O00167 538 aa23.76■■□□□ 1.39
PKP3-204ENST00000526971 IGF2BP3O00425 579 aaKnown RBP eCLIP23.76■■□□□ 1.39
PKP3-204ENST00000526971 GNAI2P04899 355 aa23.76■■□□□ 1.39
PKP3-204ENST00000526971 FKBP1AP62942 108 aaKnown RBP23.76■■□□□ 1.39
PKP3-204ENST00000526971 UBE4AQ14139 1066 aa23.76■■□□□ 1.39
PKP3-204ENST00000526971 NBPF12Q5TAG4 269 aaPredicted RBP23.76■■□□□ 1.39
PKP3-204ENST00000526971 IFNL1Q8IU54 200 aa23.76■■□□□ 1.39
PKP3-204ENST00000526971 PPP2R3BQ9Y5P8 575 aa23.76■■□□□ 1.39
PKP3-204ENST00000526971 GJA5P36382 358 aa23.75■■□□□ 1.39
PKP3-204ENST00000526971 METTL24Q5JXM2 366 aa23.75■■□□□ 1.39
PKP3-204ENST00000526971 ITPRIPQ8IWB1 547 aa23.75■■□□□ 1.39
PKP3-204ENST00000526971 SLC10A4Q96EP9 437 aa23.75■■□□□ 1.39
PKP3-204ENST00000526971 VEZTQ9HBM0 779 aa23.75■■□□□ 1.39
PKP3-204ENST00000526971 MKI67P46013 3256 aaKnown RBP23.74■■□□□ 1.39
PKP3-204ENST00000526971 MANSC4A6NHS7 340 aaPredicted RBP23.74■■□□□ 1.39
PKP3-204ENST00000526971 MS4A1P11836 297 aa23.74■■□□□ 1.39
PKP3-204ENST00000526971 MTX1Q13505 466 aa23.74■■□□□ 1.39
PKP3-204ENST00000526971 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
PKP3-204ENST00000526971 FBXO3Q9UK99 471 aa23.74■■□□□ 1.39
PKP3-204ENST00000526971 PDE8BO95263 885 aa23.73■■□□□ 1.39
PKP3-204ENST00000526971 ZBTB48P10074 688 aaPredicted RBP23.73■■□□□ 1.39
PKP3-204ENST00000526971 PRPF38BQ5VTL8 546 aaKnown RBP23.73■■□□□ 1.39
PKP3-204ENST00000526971 VGLL2Q8N8G2 317 aa23.73■■□□□ 1.39
PKP3-204ENST00000526971 PANK1Q8TE04 598 aa23.73■■□□□ 1.39
PKP3-204ENST00000526971 RBBP6Q7Z6E9 1792 aaKnown RBP23.73■■□□□ 1.39
PKP3-204ENST00000526971 KIAA0100Q14667 2235 aaKnown RBP23.72■■□□□ 1.39
PKP3-204ENST00000526971 ZBTB7BO15156 539 aaPredicted RBP23.72■■□□□ 1.39
PKP3-204ENST00000526971 PPP1R12BO60237 982 aaPredicted RBP23.72■■□□□ 1.39
PKP3-204ENST00000526971 USP2O75604 605 aaPredicted RBP23.72■■□□□ 1.39
PKP3-204ENST00000526971 CIAO1O76071 339 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 ALDH1A1P00352 501 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 ATG9AQ7Z3C6 839 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 CDAN1Q8IWY9 1227 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 COPRSQ9NQ92 184 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 FAM205AQ6ZU69 1335 aa23.72■■□□□ 1.39
PKP3-204ENST00000526971 SRGAP3O43295 1099 aa23.71■■□□□ 1.39
PKP3-204ENST00000526971 MYO1BO43795 1136 aa23.71■■□□□ 1.39
PKP3-204ENST00000526971 GYG1P46976 350 aa23.71■■□□□ 1.39
PKP3-204ENST00000526971 RASA3Q14644 834 aa23.71■■□□□ 1.39
PKP3-204ENST00000526971 TDRD7Q8NHU6 1098 aaKnown RBP23.71■■□□□ 1.39
PKP3-204ENST00000526971 SIL1Q9H173 461 aa23.71■■□□□ 1.39
PKP3-204ENST00000526971 RBM5P52756 815 aaKnown RBP eCLIP23.7■■□□□ 1.38
PKP3-204ENST00000526971 SUPT20HL1Q3ZLR7 823 aa23.7■■□□□ 1.38
PKP3-204ENST00000526971 SPDYE2Q495Y8 402 aa23.7■■□□□ 1.38
PKP3-204ENST00000526971 PA2G4Q9UQ80 394 aaKnown RBP23.7■■□□□ 1.38
PKP3-204ENST00000526971 TRIM17Q9Y577 477 aa23.7■■□□□ 1.38
PKP3-204ENST00000526971 BRCA2P51587 3418 aa23.7■■□□□ 1.38
PKP3-204ENST00000526971 INHBEP58166 350 aa23.69■■□□□ 1.38
PKP3-204ENST00000526971 CAP1Q01518 475 aa23.69■■□□□ 1.38
PKP3-204ENST00000526971 MFSD14BQ5SR56 506 aa23.69■■□□□ 1.38
PKP3-204ENST00000526971 OTOP1Q7RTM1 612 aa23.69■■□□□ 1.38
PKP3-204ENST00000526971 HIBADHP31937 336 aaKnown RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 IL15P40933 162 aaPredicted RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 IREB2P48200 963 aaKnown RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 PUM3Q15397 648 aaKnown RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 FAM84BQ96KN1 310 aaPredicted RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 PTPN18Q99952 460 aa23.68■■□□□ 1.38
PKP3-204ENST00000526971 TDRD3Q9H7E2 651 aaKnown RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 ZNF70Q9UC06 446 aaPredicted RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 TTF2Q9UNY4 1162 aaKnown RBP23.68■■□□□ 1.38
PKP3-204ENST00000526971 UNCXA6NJT0 531 aa23.67■■□□□ 1.38
PKP3-204ENST00000526971 FGFR2P21802 821 aa23.67■■□□□ 1.38
PKP3-204ENST00000526971 CRHR2Q13324 411 aa23.67■■□□□ 1.38
PKP3-204ENST00000526971 GRIK5Q16478 980 aa23.67■■□□□ 1.38
PKP3-204ENST00000526971 TEPSINQ96N21 525 aa23.67■■□□□ 1.38
PKP3-204ENST00000526971 PNMA6EA0A0J9YXQ4 647 aa23.66■■□□□ 1.38
PKP3-204ENST00000526971 FBXO33Q7Z6M2 555 aa23.66■■□□□ 1.38
PKP3-204ENST00000526971 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
PKP3-204ENST00000526971 ELP3Q9H9T3 547 aa23.66■■□□□ 1.38
PKP3-204ENST00000526971 CEP126Q9P2H0 1117 aa23.66■■□□□ 1.38
PKP3-204ENST00000526971 IFIT1P09914 478 aaKnown RBP23.65■■□□□ 1.38
PKP3-204ENST00000526971 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
PKP3-204ENST00000526971 CD99L2Q8TCZ2 262 aa23.65■■□□□ 1.38
PKP3-204ENST00000526971 CNKSR2Q8WXI2 1034 aa23.65■■□□□ 1.38
PKP3-204ENST00000526971 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
PKP3-204ENST00000526971 SERPINA10Q9UK55 444 aa23.65■■□□□ 1.38
PKP3-204ENST00000526971 ZSWIM8A7E2V4 1837 aa23.65■■□□□ 1.38
PKP3-204ENST00000526971 TESPA1A2RU30 521 aaPredicted RBP23.64■■□□□ 1.37
PKP3-204ENST00000526971 POTEFA5A3E0 1075 aa23.64■■□□□ 1.37
PKP3-204ENST00000526971 ATP8B2P98198 1209 aa23.64■■□□□ 1.37
PKP3-204ENST00000526971 MVPQ14764 893 aaKnown RBP23.64■■□□□ 1.37
PKP3-204ENST00000526971 CAVIN4Q5BKX8 364 aa23.64■■□□□ 1.37
PKP3-204ENST00000526971 LPIN2Q92539 896 aa23.64■■□□□ 1.37
PKP3-204ENST00000526971 IQSEC3Q9UPP2 1182 aaPredicted RBP23.64■■□□□ 1.37
PKP3-204ENST00000526971 MYH13Q9UKX3 1938 aa23.64■■□□□ 1.37
PKP3-204ENST00000526971 CRKP46108 304 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 POLA2Q14181 598 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
PKP3-204ENST00000526971 VPS37DQ86XT2 251 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 OPTNQ96CV9 577 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 MS4A4AQ96JQ5 239 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 TMEM39BQ9GZU3 492 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 COG6Q9Y2V7 657 aa23.63■■□□□ 1.37
PKP3-204ENST00000526971 TCP10L2B9ZVM9 353 aa23.62■■□□□ 1.37
PKP3-204ENST00000526971 SLC5A1P13866 664 aa23.62■■□□□ 1.37
PKP3-204ENST00000526971 TNFAIP1Q13829 316 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms