RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 STARD3NLO95772 234 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 GNRH1P01148 92 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 AVPP01185 164 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 CBLBQ13191 982 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 TPCN2Q8NHX9 752 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 DGAT1O75907 488 aa12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 DKK1O94907 266 aa12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 FAM182BQ5T319 152 aa12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
CCDC90B-206ENST00000526265 LY75O60449 1722 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 C5P01031 1676 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 DPYDQ12882 1025 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 MEIOBQ8N635 442 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 SUPT16HQ9Y5B9 1047 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-206ENST00000526265 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 SIK1P57059 783 aa12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 PTPRCP08575 1304 aa12.73□□□□□ -0.37
CCDC90B-206ENST00000526265 PLSCR1O15162 318 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 BCAR3O75815 825 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 TRIM37O94972 964 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 NEFLP07196 543 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 SEC13P55735 322 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 PKDCCQ504Y2 493 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 STK32AQ8WU08 396 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
CCDC90B-206ENST00000526265 SCNN1DP51172 638 aa12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 GDF10P55107 478 aa12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 TJP1Q07157 1748 aa12.71□□□□□ -0.37
CCDC90B-206ENST00000526265 M0R2N6 131 aa12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 PDE3AQ14432 1141 aa12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 TMEM164Q5U3C3 297 aa12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.38
CCDC90B-206ENST00000526265 COL5A3P25940 1745 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 TMEM229AB2RXF0 380 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 PTGIRP43119 386 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 SMCPP49901 116 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 ETNK1Q9HBU6 452 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
CCDC90B-206ENST00000526265 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 INHAP05111 366 aa12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 TSEN34Q9BSV6 310 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-206ENST00000526265 APBA3O96018 575 aa12.68□□□□□ -0.38
CCDC90B-206ENST00000526265 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
CCDC90B-206ENST00000526265 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
CCDC90B-206ENST00000526265 ZNF358Q9NW07 568 aa12.68□□□□□ -0.38
CCDC90B-206ENST00000526265 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
CCDC90B-206ENST00000526265 RREB1Q92766 1687 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 SFI1A8K8P3 1242 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 BACH1O14867 736 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 CLN3Q13286 438 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 FTSJ3Q8IY81 847 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
CCDC90B-206ENST00000526265 RELBQ01201 579 aa12.66□□□□□ -0.38
CCDC90B-206ENST00000526265 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-206ENST00000526265 TRAIPQ9BWF2 469 aa12.66□□□□□ -0.38
CCDC90B-206ENST00000526265 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms