RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 PODXL2Q9NZ53 605 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 IQCA1LA6NCM1 817 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 REC8O95072 547 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
VPS11-201ENST00000524454 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS11-201ENST00000524454 CHRNDQ07001 517 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 FSTL1Q12841 308 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
VPS11-201ENST00000524454 MAP1SQ66K74 1059 aaPredicted RBP8.61□□□□□ -1.03
VPS11-201ENST00000524454 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 TXNRD3Q86VQ6 643 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 RHPN1Q8TCX5 695 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 EYA3Q99504 573 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 C22orf23Q9BZE7 217 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
VPS11-201ENST00000524454 VPS33BQ9H267 617 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 DAXXQ9UER7 740 aaPredicted RBP8.61□□□□□ -1.03
VPS11-201ENST00000524454 RFX7Q2KHR2 1363 aa8.61□□□□□ -1.03
VPS11-201ENST00000524454 ERC2O15083 957 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
VPS11-201ENST00000524454 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 CCDC57Q2TAC2 916 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 TAF7LQ5H9L4 462 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
VPS11-201ENST00000524454 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 TRPM4Q8TD43 1214 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 FBXW7Q969H0 707 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 IL17RAQ96F46 866 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 MXD3Q9BW11 206 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 PUS3Q9BZE2 481 aaKnown RBP8.6□□□□□ -1.03
VPS11-201ENST00000524454 GPRC5DQ9NZD1 345 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
VPS11-201ENST00000524454 GLRX3O76003 335 aaKnown RBP8.59□□□□□ -1.03
VPS11-201ENST00000524454 EGFRP00533 1210 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 SDSP20132 328 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 KCNJ4P48050 445 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 APLP1P51693 650 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 TNIP1Q15025 636 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 LDHDQ86WU2 507 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 SNX21Q969T3 373 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 GPR108Q9NPR9 543 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 MED23Q9ULK4 1368 aa8.59□□□□□ -1.03
VPS11-201ENST00000524454 ZNF804BA4D1E1 1349 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 TRPM7Q96QT4 1865 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 TRAF5O00463 557 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 HIRAP54198 1017 aaPredicted RBP8.58□□□□□ -1.04
VPS11-201ENST00000524454 TBC1D10BQ4KMP7 808 aaPredicted RBP8.58□□□□□ -1.04
VPS11-201ENST00000524454 LRRC24Q50LG9 513 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
VPS11-201ENST00000524454 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 LDHAL6AQ6ZMR3 332 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 CNOT7Q9UIV1 285 aaKnown RBP8.58□□□□□ -1.04
VPS11-201ENST00000524454 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
VPS11-201ENST00000524454 POLR2AP24928 1970 aaKnown RBP8.58□□□□□ -1.04
VPS11-201ENST00000524454 HIP1O00291 1037 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 CIAO1O76071 339 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 SLC34A2O95436 690 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 ANAPC15P60006 121 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 G3BP1Q13283 466 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS11-201ENST00000524454 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 PNMA8AQ86V59 439 aaPredicted RBP8.57□□□□□ -1.04
VPS11-201ENST00000524454 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 PI4K2BQ8TCG2 481 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 ANKRD2Q9GZV1 360 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 ADARB2Q9NS39 739 aaKnown RBP8.57□□□□□ -1.04
VPS11-201ENST00000524454 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 ECHDC1Q9NTX5 307 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 LEMD3Q9Y2U8 911 aa8.57□□□□□ -1.04
VPS11-201ENST00000524454 ASTN2O75129 1339 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 PASKQ96RG2 1323 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 IRS2Q9Y4H2 1338 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 MYH13Q9UKX3 1938 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 SNPHO15079 494 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 ST18O60284 1047 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 RFX5P48382 616 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 RABEP1Q15276 862 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 USP50Q70EL3 339 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 OTUD7AQ8TE49 926 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 ANP32EQ9BTT0 268 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 GLIS2Q9BZE0 524 aaPredicted RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 SIL1Q9H173 461 aa8.56□□□□□ -1.04
VPS11-201ENST00000524454 SCAF8Q9UPN6 1271 aaKnown RBP8.56□□□□□ -1.04
VPS11-201ENST00000524454 RAD50Q92878 1312 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 H7C1D1 291 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
VPS11-201ENST00000524454 IL15P40933 162 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms