RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 DBF4Q9UBU7 674 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 FBXO9Q9UK97 447 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 TPCN1Q9ULQ1 816 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 PA2G4Q9UQ80 394 aaKnown RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 RBM8AQ9Y5S9 174 aaKnown RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 COMMD10Q9Y6G5 202 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 DCCP43146 1447 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 HIP1O00291 1037 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 AP5Z1O43299 807 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 PSMA5P28066 241 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 CLCN6P51797 869 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 CREB3L3Q68CJ9 461 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 TMCO3Q6UWJ1 677 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 MAP3K20Q9NYL2 800 aaKnown RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
HDAC9-227ENST00000523867 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 CHMP3Q9Y3E7 222 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 ADCY9O60503 1353 aa8.49□□□□□ -1.05
HDAC9-227ENST00000523867 ALDH1L1O75891 902 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 PDCP20941 246 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 CORO7P57737 925 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 PTPN14Q15678 1187 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 ZSCAN25Q6NSZ9 544 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 L2HGDHQ9H9P8 463 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 KLF15Q9UIH9 416 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 G3BP2Q9UN86 482 aaKnown RBP8.48□□□□□ -1.05
HDAC9-227ENST00000523867 KLHL33A6NCF5 533 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 GOLGA6L4A6NEF3 574 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 CDC25BP30305 580 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 USP8P40818 1118 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
HDAC9-227ENST00000523867 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 ZRSR1Q15695 479 aaKnown RBP8.48□□□□□ -1.05
HDAC9-227ENST00000523867 NBPF6Q5VWK0 638 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 POTEAQ6S8J7 498 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 LEKR1Q6ZMV7 388 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 TTC6Q86TZ1 520 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-227ENST00000523867 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 NBPF4Q96M43 638 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 FAM227BQ96M60 508 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 NUP62CLQ9H1M0 184 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 WWC3Q9ULE0 1092 aa8.48□□□□□ -1.05
HDAC9-227ENST00000523867 RGPD8O14715 1765 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 NEXNQ0ZGT2 675 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 NMIQ13287 307 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 ANKRD1Q15327 319 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 CAMK4Q16566 473 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 BLOC1S2Q6QNY1 142 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 STAG1Q8WVM7 1258 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 IP6K1Q92551 441 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 SPACA7Q96KW9 195 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 C8orf37Q96NL8 207 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 FAM107BQ9H098 131 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 SLAIN2Q9P270 581 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 CRYBG1Q9Y4K1 1723 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 EIF3CLB5ME19 914 aaKnown RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 SLC27A2O14975 620 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 ST5P78524 1137 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 G3BP1Q13283 466 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 CWF19L2Q2TBE0 894 aaKnown RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 AKAP4Q5JQC9 854 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 FAM173BQ6P4H8 233 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 ZNF530Q6P9A1 599 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 KSR2Q6VAB6 950 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 CCDC186Q7Z3E2 898 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
HDAC9-227ENST00000523867 IRF2BPLQ9H1B7 796 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
HDAC9-227ENST00000523867 C21orf2O43822 256 aa8.46□□□□□ -1.05
HDAC9-227ENST00000523867 TYRO3Q06418 890 aa8.46□□□□□ -1.05
HDAC9-227ENST00000523867 REXO1L1PQ8IX06 675 aa8.46□□□□□ -1.05
HDAC9-227ENST00000523867 FSD1Q9BTV5 496 aa8.46□□□□□ -1.05
HDAC9-227ENST00000523867 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-227ENST00000523867 CCDC8Q9H0W5 538 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-227ENST00000523867 TNMDQ9H2S6 317 aa8.46□□□□□ -1.05
HDAC9-227ENST00000523867 ZSCAN16Q9H4T2 348 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-227ENST00000523867 hCG_2014768A0A024R1R8 64 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-227ENST00000523867 LUZP1Q86V48 1076 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 CKAP2LQ8IYA6 745 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 MKL1Q969V6 931 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 EAF2Q96CJ1 260 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-227ENST00000523867 TCEANC2Q96MN5 208 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 A1CFQ9NQ94 594 aaKnown RBP8.46□□□□□ -1.06
HDAC9-227ENST00000523867 DACT1Q9NYF0 836 aa8.46□□□□□ -1.06
HDAC9-227ENST00000523867 MRVI1Q9Y6F6 885 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms