RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 TTF2Q9UNY4 1162 aaKnown RBP19.7■□□□□ 0.74
LSM1-204ENST00000522515 GMPSP49915 693 aaPredicted RBP19.69■□□□□ 0.74
LSM1-204ENST00000522515 SLFNL1Q499Z3 407 aa19.69■□□□□ 0.74
LSM1-204ENST00000522515 SLC9C2Q5TAH2 1124 aa19.69■□□□□ 0.74
LSM1-204ENST00000522515 DZIP1Q86YF9 867 aaKnown RBP19.69■□□□□ 0.74
LSM1-204ENST00000522515 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
LSM1-204ENST00000522515 PDE6AP16499 860 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
LSM1-204ENST00000522515 SCNN1DP51172 638 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 DIXDC1Q155Q3 683 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 DPY19L2Q6NUT2 758 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 MAGEB6Q8N7X4 407 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 MYH7P12883 1935 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 MAST2Q6P0Q8 1798 aa19.68■□□□□ 0.74
LSM1-204ENST00000522515 ADD2P35612 726 aa19.67■□□□□ 0.74
LSM1-204ENST00000522515 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
LSM1-204ENST00000522515 TCRBV5S4A2TA0A5A2 114 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 SHTN1A0MZ66 631 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 RNF113AO15541 343 aaKnown RBP19.66■□□□□ 0.74
LSM1-204ENST00000522515 USP17L8P0C7I0 530 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
LSM1-204ENST00000522515 ZSCAN25Q6NSZ9 544 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 DPF2Q92785 391 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 GLTPD2A6NH11 291 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 IGSF3O75054 1194 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 CYP7A1P22680 504 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 ADGRA1Q86SQ6 560 aa19.66■□□□□ 0.74
LSM1-204ENST00000522515 MAST3O60307 1309 aa19.65■□□□□ 0.74
LSM1-204ENST00000522515 ADAMTSL1Q8N6G6 1762 aa19.65■□□□□ 0.74
LSM1-204ENST00000522515 ZFYP08048 801 aaPredicted RBP19.65■□□□□ 0.74
LSM1-204ENST00000522515 UBE3CQ15386 1083 aa19.65■□□□□ 0.74
LSM1-204ENST00000522515 LRRFIP1Q32MZ4 808 aaKnown RBP19.65■□□□□ 0.74
LSM1-204ENST00000522515 OGFOD1Q8N543 542 aa19.65■□□□□ 0.74
LSM1-204ENST00000522515 MYH2Q9UKX2 1941 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 CHMLP26374 656 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 GSTO1P78417 241 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 TICAM2Q86XR7 235 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 MICALL2Q8IY33 904 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 FAM227BQ96M60 508 aa19.64■□□□□ 0.73
LSM1-204ENST00000522515 CNOT7Q9UIV1 285 aaKnown RBP19.64■□□□□ 0.73
LSM1-204ENST00000522515 CRKP46108 304 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 HDLBPQ00341 1268 aaKnown RBP19.63■□□□□ 0.73
LSM1-204ENST00000522515 NMIQ13287 307 aaPredicted RBP19.63■□□□□ 0.73
LSM1-204ENST00000522515 ZMYM1Q5SVZ6 1142 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 HHIPL2Q6UWX4 724 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 TEKT1Q969V4 418 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 SEC62Q99442 399 aaKnown RBP19.63■□□□□ 0.73
LSM1-204ENST00000522515 MRIQ9BWK5 157 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 DIAPH3Q9NSV4 1193 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 GPRC5DQ9NZD1 345 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 SERPINA10Q9UK55 444 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 HDAC9Q9UKV0 1011 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 DAGLAQ9Y4D2 1042 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 PCDHAC2Q9Y5I4 1007 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 MROH7-TTC4A0A0A0MT08 1334 aa19.63■□□□□ 0.73
LSM1-204ENST00000522515 CDC45O75419 566 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 LDHCP07864 332 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 ZNF280AP59817 542 aaPredicted RBP19.62■□□□□ 0.73
LSM1-204ENST00000522515 TMED8Q6PL24 325 aaPredicted RBP19.62■□□□□ 0.73
LSM1-204ENST00000522515 CWC27Q6UX04 472 aaKnown RBP19.62■□□□□ 0.73
LSM1-204ENST00000522515 SLF2Q8IX21 1173 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 APPBP2Q92624 585 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 OSBP2Q969R2 916 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 FAM163AQ96GL9 167 aaPredicted RBP19.62■□□□□ 0.73
LSM1-204ENST00000522515 PUS7LQ9H0K6 701 aaKnown RBP19.62■□□□□ 0.73
LSM1-204ENST00000522515 GAKO14976 1311 aa19.62■□□□□ 0.73
LSM1-204ENST00000522515 A0A0D9SFI3 127 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 HIP1O00291 1037 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 RBM5P52756 815 aaKnown RBP eCLIP19.61■□□□□ 0.73
LSM1-204ENST00000522515 MIGA1Q8NAN2 632 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
LSM1-204ENST00000522515 EPS15P42566 896 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 CFAP100Q494V2 611 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
LSM1-204ENST00000522515 H7C1D1 291 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 M0R2C6 588 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 EGFRP00533 1210 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 MMP14P50281 582 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 SAMD7Q7Z3H4 446 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 ZDHHC15Q96MV8 337 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 IL25Q9H293 177 aa19.6■□□□□ 0.73
LSM1-204ENST00000522515 AATFQ9NY61 560 aaKnown RBP eCLIP19.6■□□□□ 0.73
LSM1-204ENST00000522515 GPR75-ASB3A0A0A6YYF3 556 aa19.59■□□□□ 0.73
LSM1-204ENST00000522515 LMOD1P29536 600 aaPredicted RBP19.59■□□□□ 0.73
LSM1-204ENST00000522515 BTDP43251 543 aa19.59■□□□□ 0.73
LSM1-204ENST00000522515 DYNLL1P63167 89 aaKnown RBP19.59■□□□□ 0.73
LSM1-204ENST00000522515 RBM26Q5T8P6 1007 aaKnown RBP19.59■□□□□ 0.73
LSM1-204ENST00000522515 APOBEC3HQ6NTF7 200 aaKnown RBP19.59■□□□□ 0.73
LSM1-204ENST00000522515 PRMT6Q96LA8 375 aaPredicted RBP19.59■□□□□ 0.73
LSM1-204ENST00000522515 HELLSQ9NRZ9 838 aa19.59■□□□□ 0.73
LSM1-204ENST00000522515 DLGAP5Q15398 846 aa19.58■□□□□ 0.73
LSM1-204ENST00000522515 TBC1D10BQ4KMP7 808 aaPredicted RBP19.58■□□□□ 0.73
LSM1-204ENST00000522515 MTMR14Q8NCE2 650 aa19.58■□□□□ 0.73
LSM1-204ENST00000522515 ZBED3Q96IU2 234 aaPredicted RBP19.58■□□□□ 0.73
LSM1-204ENST00000522515 RIOK1Q9BRS2 568 aaKnown RBP19.58■□□□□ 0.73
LSM1-204ENST00000522515 WDR90Q96KV7 1748 aa19.58■□□□□ 0.72
LSM1-204ENST00000522515 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
LSM1-204ENST00000522515 SPDYE2BA6NHP3 402 aa19.57■□□□□ 0.72
LSM1-204ENST00000522515 POTECB2RU33 542 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms