RNA–Protein interactions for RNA: ENST00000521990.1

TSPAN18-210, Transcript of tetraspanin 18, humanhuman

TSL 2

Gene TSPAN18, Length 700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-210ENST00000521990 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
TSPAN18-210ENST00000521990 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
TSPAN18-210ENST00000521990 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
TSPAN18-210ENST00000521990 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
TSPAN18-210ENST00000521990 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
TSPAN18-210ENST00000521990 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
TSPAN18-210ENST00000521990 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 PTPN12Q05209 780 aaKnown RBP17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 MCOLN1Q9GZU1 580 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 SAGE1Q9NXZ1 904 aa17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
TSPAN18-210ENST00000521990 CCDC85CA6NKD9 419 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 MYO1BO43795 1136 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 PDE8BO95263 885 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 DGKZQ13574 1117 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 POLA2Q14181 598 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 ARMC9Q7Z3E5 817 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 VPS37DQ86XT2 251 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 VGLL2Q8N8G2 317 aa17.71■□□□□ 0.43
TSPAN18-210ENST00000521990 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
TSPAN18-210ENST00000521990 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
TSPAN18-210ENST00000521990 GRIK5Q16478 980 aa17.7■□□□□ 0.42
TSPAN18-210ENST00000521990 FBXO33Q7Z6M2 555 aa17.7■□□□□ 0.42
TSPAN18-210ENST00000521990 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
TSPAN18-210ENST00000521990 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 BCAMP50895 628 aa17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 CAVIN4Q5BKX8 364 aa17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 SSC5DA1L4H1 1573 aa17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 ARAP2Q8WZ64 1704 aa17.69■□□□□ 0.42
TSPAN18-210ENST00000521990 LDLRAD1Q5T700 205 aa17.68■□□□□ 0.42
TSPAN18-210ENST00000521990 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
TSPAN18-210ENST00000521990 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
TSPAN18-210ENST00000521990 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
TSPAN18-210ENST00000521990 PPP2R3BQ9Y5P8 575 aa17.68■□□□□ 0.42
TSPAN18-210ENST00000521990 EYA2O00167 538 aa17.67■□□□□ 0.42
TSPAN18-210ENST00000521990 RASA3Q14644 834 aa17.67■□□□□ 0.42
TSPAN18-210ENST00000521990 ZNF70Q9UC06 446 aaPredicted RBP17.67■□□□□ 0.42
TSPAN18-210ENST00000521990 SERPINA10Q9UK55 444 aa17.67■□□□□ 0.42
TSPAN18-210ENST00000521990 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
TSPAN18-210ENST00000521990 TBC1D8O95759 1140 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 CRKP46108 304 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 PUM3Q15397 648 aaKnown RBP17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 CLMNQ96JQ2 1002 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 SIL1Q9H173 461 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
TSPAN18-210ENST00000521990 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 IGHDP01880 384 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 IFIT1P09914 478 aaKnown RBP17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 FGFR2P21802 821 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 TM4SF4P48230 202 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 SUPT20HL1Q3ZLR7 823 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 SPRYD7Q5W111 196 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 ATG9AQ7Z3C6 839 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 SLC10A4Q96EP9 437 aa17.65■□□□□ 0.42
TSPAN18-210ENST00000521990 TCP10L2B9ZVM9 353 aa17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 CIAO1O76071 339 aa17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 CDAN1Q8IWY9 1227 aa17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 TBC1D22AQ8WUA7 517 aa17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
TSPAN18-210ENST00000521990 USP2O75604 605 aaPredicted RBP17.63■□□□□ 0.41
TSPAN18-210ENST00000521990 SLC5A1P13866 664 aa17.63■□□□□ 0.41
TSPAN18-210ENST00000521990 G3BP1Q13283 466 aaKnown RBP eCLIP17.63■□□□□ 0.41
TSPAN18-210ENST00000521990 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
TSPAN18-210ENST00000521990 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 CACNB3P54284 484 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 SREBF2Q12772 1141 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 LPIN2Q92539 896 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
TSPAN18-210ENST00000521990 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 IREB2P48200 963 aaKnown RBP17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 TEKT1Q969V4 418 aa17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 WNK4Q96J92 1243 aa17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
TSPAN18-210ENST00000521990 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
TSPAN18-210ENST00000521990 OS9Q13438 667 aaPredicted RBP17.6■□□□□ 0.41
TSPAN18-210ENST00000521990 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
TSPAN18-210ENST00000521990 CTU1Q7Z7A3 348 aaKnown RBP17.6■□□□□ 0.41
TSPAN18-210ENST00000521990 R3HDMLQ9H3Y0 253 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms