RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TTF2Q9UNY4 1162 aaKnown RBP29.26■■■□□ 2.27
PVT1-212ENST00000521951 MECOMQ03112 1051 aa29.25■■■□□ 2.27
PVT1-212ENST00000521951 ZNF384Q8TF68 577 aa29.25■■■□□ 2.27
PVT1-212ENST00000521951 NSUN4Q96CB9 384 aaKnown RBP29.25■■■□□ 2.27
PVT1-212ENST00000521951 IGSF3O75054 1194 aa29.25■■■□□ 2.27
PVT1-212ENST00000521951 DZIP1Q86YF9 867 aaKnown RBP29.25■■■□□ 2.27
PVT1-212ENST00000521951 DPF2Q92785 391 aa29.25■■■□□ 2.27
PVT1-212ENST00000521951 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.25■■■□□ 2.27
PVT1-212ENST00000521951 SLC9C2Q5TAH2 1124 aa29.24■■■□□ 2.27
PVT1-212ENST00000521951 GLTPD2A6NH11 291 aa29.23■■■□□ 2.27
PVT1-212ENST00000521951 MAGEB6Q8N7X4 407 aa29.23■■■□□ 2.27
PVT1-212ENST00000521951 MAST2Q6P0Q8 1798 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 MYH2Q9UKX2 1941 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 CHGBP05060 677 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 USP17L8P0C7I0 530 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 PDE6AP16499 860 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 SCNN1DP51172 638 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 ZSCAN25Q6NSZ9 544 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 MAST3O60307 1309 aa29.22■■■□□ 2.27
PVT1-212ENST00000521951 RNF113AO15541 343 aaKnown RBP29.21■■■□□ 2.27
PVT1-212ENST00000521951 ADD2P35612 726 aa29.21■■■□□ 2.27
PVT1-212ENST00000521951 DIXDC1Q155Q3 683 aa29.21■■■□□ 2.27
PVT1-212ENST00000521951 SLFNL1Q499Z3 407 aa29.21■■■□□ 2.27
PVT1-212ENST00000521951 NAA16Q6N069 864 aaPredicted RBP29.21■■■□□ 2.27
PVT1-212ENST00000521951 TICAM2Q86XR7 235 aa29.21■■■□□ 2.27
PVT1-212ENST00000521951 LRRFIP1Q32MZ4 808 aaKnown RBP29.2■■■□□ 2.27
PVT1-212ENST00000521951 MRIQ9BWK5 157 aa29.2■■■□□ 2.27
PVT1-212ENST00000521951 CNOT7Q9UIV1 285 aaKnown RBP29.2■■■□□ 2.27
PVT1-212ENST00000521951 ZNF532Q9HCE3 1301 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 TCRBV5S4A2TA0A5A2 114 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 SHTN1A0MZ66 631 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 ZFYP08048 801 aaPredicted RBP29.2■■■□□ 2.26
PVT1-212ENST00000521951 CYP7A1P22680 504 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 GSTO1P78417 241 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 OGFOD1Q8N543 542 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 HDAC9Q9UKV0 1011 aa29.2■■■□□ 2.26
PVT1-212ENST00000521951 RFX7Q2KHR2 1363 aa29.19■■■□□ 2.26
PVT1-212ENST00000521951 HDLBPQ00341 1268 aaKnown RBP29.19■■■□□ 2.26
PVT1-212ENST00000521951 UBE3CQ15386 1083 aa29.19■■■□□ 2.26
PVT1-212ENST00000521951 GPRC5DQ9NZD1 345 aa29.19■■■□□ 2.26
PVT1-212ENST00000521951 LDHCP07864 332 aa29.18■■■□□ 2.26
PVT1-212ENST00000521951 TMED8Q6PL24 325 aaPredicted RBP29.18■■■□□ 2.26
PVT1-212ENST00000521951 SLF2Q8IX21 1173 aa29.18■■■□□ 2.26
PVT1-212ENST00000521951 MICALL2Q8IY33 904 aa29.18■■■□□ 2.26
PVT1-212ENST00000521951 L3MBTL3Q96JM7 780 aaPredicted RBP29.18■■■□□ 2.26
PVT1-212ENST00000521951 CRKP46108 304 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 MMP14P50281 582 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 ZNF280AP59817 542 aaPredicted RBP29.17■■■□□ 2.26
PVT1-212ENST00000521951 HHIPL2Q6UWX4 724 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 ADGRA1Q86SQ6 560 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 TEKT1Q969V4 418 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 FAM163AQ96GL9 167 aaPredicted RBP29.17■■■□□ 2.26
PVT1-212ENST00000521951 SERPINA10Q9UK55 444 aa29.17■■■□□ 2.26
PVT1-212ENST00000521951 ADAMTSL1Q8N6G6 1762 aa29.16■■■□□ 2.26
PVT1-212ENST00000521951 MROH7-TTC4A0A0A0MT08 1334 aa29.16■■■□□ 2.26
PVT1-212ENST00000521951 HIP1O00291 1037 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 DAGLAQ9Y4D2 1042 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 GAKO14976 1311 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 H7C1D1 291 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 CHMLP26374 656 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 EPS15P42566 896 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 CFAP100Q494V2 611 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 ZMYM1Q5SVZ6 1142 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 APPBP2Q92624 585 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 DIAPH3Q9NSV4 1193 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 PCDHAC2Q9Y5I4 1007 aa29.15■■■□□ 2.26
PVT1-212ENST00000521951 LMOD1P29536 600 aaPredicted RBP29.14■■■□□ 2.25
PVT1-212ENST00000521951 RBM5P52756 815 aaKnown RBP eCLIP29.14■■■□□ 2.25
PVT1-212ENST00000521951 NMIQ13287 307 aaPredicted RBP29.14■■■□□ 2.25
PVT1-212ENST00000521951 MYOZ2Q9NPC6 264 aa29.14■■■□□ 2.25
PVT1-212ENST00000521951 OSBP2Q969R2 916 aa29.13■■■□□ 2.25
PVT1-212ENST00000521951 FAM227BQ96M60 508 aa29.13■■■□□ 2.25
PVT1-212ENST00000521951 ZDHHC15Q96MV8 337 aa29.13■■■□□ 2.25
PVT1-212ENST00000521951 WDR90Q96KV7 1748 aa29.12■■■□□ 2.25
PVT1-212ENST00000521951 CDC45O75419 566 aa29.12■■■□□ 2.25
PVT1-212ENST00000521951 SAMD7Q7Z3H4 446 aa29.12■■■□□ 2.25
PVT1-212ENST00000521951 MTMR14Q8NCE2 650 aa29.12■■■□□ 2.25
PVT1-212ENST00000521951 SEC62Q99442 399 aaKnown RBP29.12■■■□□ 2.25
PVT1-212ENST00000521951 PUS7LQ9H0K6 701 aaKnown RBP29.12■■■□□ 2.25
PVT1-212ENST00000521951 GPR75-ASB3A0A0A6YYF3 556 aa29.11■■■□□ 2.25
PVT1-212ENST00000521951 A0A0D9SFI3 127 aa29.11■■■□□ 2.25
PVT1-212ENST00000521951 DLGAP5Q15398 846 aa29.11■■■□□ 2.25
PVT1-212ENST00000521951 MIGA1Q8NAN2 632 aa29.11■■■□□ 2.25
PVT1-212ENST00000521951 EGFRP00533 1210 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 BTDP43251 543 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 RBM26Q5T8P6 1007 aaKnown RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 APOBEC3HQ6NTF7 200 aaKnown RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 CWC27Q6UX04 472 aaKnown RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 HELLSQ9NRZ9 838 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 HACL1Q9UJ83 578 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 SCN4AP35499 1836 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 POTECB2RU33 542 aa29.1■■■□□ 2.25
PVT1-212ENST00000521951 TBC1D10BQ4KMP7 808 aaPredicted RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 ZBED3Q96IU2 234 aaPredicted RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 PRMT6Q96LA8 375 aaPredicted RBP29.1■■■□□ 2.25
PVT1-212ENST00000521951 AATFQ9NY61 560 aaKnown RBP eCLIP29.1■■■□□ 2.25
PVT1-212ENST00000521951 MAGEB6P1A0A0J9YX57 407 aa29.09■■■□□ 2.25
PVT1-212ENST00000521951 SPDYE2BA6NHP3 402 aa29.09■■■□□ 2.25
PVT1-212ENST00000521951 M0R2C6 588 aa29.09■■■□□ 2.25
PVT1-212ENST00000521951 SPDYE6P0CI01 402 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms