RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PRKG1Q13976 671 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 LRRC24Q50LG9 513 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
PDGFRB-203ENST00000517660 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 PSME4Q14997 1843 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 GJA5P36382 358 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 GYG1P46976 350 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 PTPN18Q99952 460 aa13.23□□□□□ -0.29
PDGFRB-203ENST00000517660 FAM205AQ6ZU69 1335 aa13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 MANSC4A6NHS7 340 aaPredicted RBP13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 PDE8BO95263 885 aa13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
PDGFRB-203ENST00000517660 F8W031 263 aaPredicted RBP13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 EYA2O00167 538 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 NF2P35240 595 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 SP3Q02447 781 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 WNK4Q96J92 1243 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 JAG2Q9Y219 1238 aa13.21□□□□□ -0.29
PDGFRB-203ENST00000517660 KIF16BQ96L93 1317 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 INHBEP58166 350 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 VGLL2Q8N8G2 317 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
PDGFRB-203ENST00000517660 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 MYO1BO43795 1136 aa13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 PUM3Q15397 648 aaKnown RBP13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
PDGFRB-203ENST00000517660 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 CIAO1O76071 339 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 GNAI3P08754 354 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 FGFR2P21802 821 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 BCAMP50895 628 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 DPF3Q92784 378 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
PDGFRB-203ENST00000517660 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 BCAR3O75815 825 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 MTFR1Q15390 333 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 TBC1D22AQ8WUA7 517 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 LPIN2Q92539 896 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 MEIS3Q99687 375 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 CEP126Q9P2H0 1117 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 IQSEC3Q9UPP2 1182 aaPredicted RBP13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
PDGFRB-203ENST00000517660 SLC5A1P13866 664 aa13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 Q7L0L9 218 aa13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
PDGFRB-203ENST00000517660 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 CLRN2A0PK11 232 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 TRIM27P14373 513 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
PDGFRB-203ENST00000517660 SIL1Q9H173 461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms