RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
PABPC1-202ENST00000517403 CNNM1Q9NRU3 951 aa10.93□□□□□ -0.66
PABPC1-202ENST00000517403 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 E9PSI1 815 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.662e-10■■■■■ 46.2
PABPC1-202ENST00000517403 BCAMP50895 628 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 ZNF804AQ7Z570 1209 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
PABPC1-202ENST00000517403 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
PABPC1-202ENST00000517403 ANGEL1Q9UNK9 670 aaKnown RBP10.92□□□□□ -0.66
PABPC1-202ENST00000517403 PTPRCP08575 1304 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 CA12O43570 354 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 SLURP2P0DP57 97 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 FKBP1AP62942 108 aaKnown RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 FKBP1BP68106 108 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 UBE4AQ14139 1066 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 DLGAP5Q15398 846 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 ZNF296Q8WUU4 475 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 MEIS3Q99687 375 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
PABPC1-202ENST00000517403 ZNF70Q9UC06 446 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 PA2G4Q9UQ80 394 aaKnown RBP10.91□□□□□ -0.66
PABPC1-202ENST00000517403 USP2O75604 605 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-202ENST00000517403 SOX10P56693 466 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-202ENST00000517403 RASA3Q14644 834 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 PTPN18Q99952 460 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
PABPC1-202ENST00000517403 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
PABPC1-202ENST00000517403 TTF2Q9UNY4 1162 aaKnown RBP10.9□□□□□ -0.66
PABPC1-202ENST00000517403 SIPA1L1O43166 1804 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 DOCK2Q92608 1830 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 PDE8BO95263 885 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 ADORA1P30542 326 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 HIBADHP31937 336 aaKnown RBP10.89□□□□□ -0.67
PABPC1-202ENST00000517403 CRKP46108 304 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 TM4SF4P48230 202 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 RGS19P49795 217 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-202ENST00000517403 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-202ENST00000517403 DZIP1LQ8IYY4 767 aaKnown RBP10.89□□□□□ -0.67
PABPC1-202ENST00000517403 WNK4Q96J92 1243 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
PABPC1-202ENST00000517403 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
PABPC1-202ENST00000517403 MROH5Q6ZUA9 1318 aa10.88□□□□□ -0.67
PABPC1-202ENST00000517403 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
PABPC1-202ENST00000517403 RARSP54136 660 aaKnown RBP10.88□□□□□ -0.67
PABPC1-202ENST00000517403 APOBEC3HQ6NTF7 200 aaKnown RBP10.88□□□□□ -0.67
PABPC1-202ENST00000517403 ZNF384Q8TF68 577 aa10.88□□□□□ -0.67
PABPC1-202ENST00000517403 SIL1Q9H173 461 aa10.88□□□□□ -0.67
PABPC1-202ENST00000517403 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
PABPC1-202ENST00000517403 LRRFIP2Q9Y608 721 aaKnown RBP10.88□□□□□ -0.67
PABPC1-202ENST00000517403 PHIPQ8WWQ0 1821 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 BRCA2P51587 3418 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 EYA2O00167 538 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 PRDX5P30044 214 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 PHKA1P46020 1223 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 ALDH1L2Q3SY69 923 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 CENPFP49454 3210 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
PABPC1-202ENST00000517403 MYH2Q9UKX2 1941 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 RBBP6Q7Z6E9 1792 aaKnown RBP10.86□□□□□ -0.67
PABPC1-202ENST00000517403 GPR25O00155 361 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 BCAR3O75815 825 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 NUBP1P53384 320 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 NFIAQ12857 509 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 MS4A4AQ96JQ5 239 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 SERPINA10Q9UK55 444 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 CDK5RAP2Q96SN8 1893 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 PTPRFP10586 1907 aa10.86□□□□□ -0.67
PABPC1-202ENST00000517403 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
PABPC1-202ENST00000517403 TRIM27P14373 513 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.672e-12■■■■□ 23.8
PABPC1-202ENST00000517403 VGLL4Q14135 290 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
PABPC1-202ENST00000517403 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 ARMC9Q7Z3E5 817 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 CTU1Q7Z7A3 348 aaKnown RBP10.85□□□□□ -0.67
PABPC1-202ENST00000517403 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.67
PABPC1-202ENST00000517403 BRI3BPQ8WY22 251 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 DAGLAQ9Y4D2 1042 aa10.85□□□□□ -0.67
PABPC1-202ENST00000517403 PPP2R3BQ9Y5P8 575 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 2431.9 ms