RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 MRC1P22897 1456 aa7.8□□□□□ -1.16
GYPB-215ENST00000513677 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
GYPB-215ENST00000513677 SCN7AQ01118 1682 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 FER1L6Q2WGJ9 1857 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 U2SURPO15042 1029 aaKnown RBP7.79□□□□□ -1.16
GYPB-215ENST00000513677 TRAK2O60296 914 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 A1BGP04217 495 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
GYPB-215ENST00000513677 SCTRP47872 440 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 ST5P78524 1137 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 TRIM26Q12899 539 aaPredicted RBP7.79□□□□□ -1.16
GYPB-215ENST00000513677 SCARF1Q14162 830 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 TSGA10IPQ3SY00 556 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 CC2D2BQ6DHV5 1058 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 PRPF40BQ6NWY9 871 aaKnown RBP7.79□□□□□ -1.16
GYPB-215ENST00000513677 CNBD1Q8NA66 436 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 GLMNQ92990 594 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 AIDAQ96BJ3 306 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 AGBL1Q96MI9 1066 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 SETDB2Q96T68 719 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 BRIP1Q9BX63 1249 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 SLX4Q8IY92 1834 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 UBR2Q8IWV8 1755 aa7.79□□□□□ -1.16
GYPB-215ENST00000513677 DIAPH1O60610 1272 aaKnown RBP7.78□□□□□ -1.16
GYPB-215ENST00000513677 UPP2O95045 317 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 ADH1AP07327 375 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 BMP2P12643 396 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 EIF5P55010 431 aaKnown RBP7.78□□□□□ -1.16
GYPB-215ENST00000513677 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 CC2D1BQ5T0F9 858 aaKnown RBP7.78□□□□□ -1.16
GYPB-215ENST00000513677 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 ZNF496Q96IT1 587 aaPredicted RBP7.78□□□□□ -1.16
GYPB-215ENST00000513677 ZFP42Q96MM3 310 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 SENP2Q9HC62 589 aa7.78□□□□□ -1.16
GYPB-215ENST00000513677 HEG1Q9ULI3 1381 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 RELBQ01201 579 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 GRM1Q13255 1194 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 OXLD1Q5BKU9 147 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 CNKSR1Q969H4 720 aa7.77□□□□□ -1.17
GYPB-215ENST00000513677 TSEN34Q9BSV6 310 aaKnown RBP7.77□□□□□ -1.17
GYPB-215ENST00000513677 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
GYPB-215ENST00000513677 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 IQCA1LA6NCM1 817 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 SRGNP10124 158 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 SKIP12755 728 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 VEGFBP49765 207 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 LBX1P52954 281 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 STYK1Q6J9G0 422 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 ZNF790Q6PG37 636 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 OLFM4Q6UX06 510 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 LDHDQ86WU2 507 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
GYPB-215ENST00000513677 IL17REQ8NFR9 667 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 MASTLQ96GX5 879 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 TRIM47Q96LD4 638 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 UCN2Q96RP3 112 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 TAF1DQ9H5J8 278 aaPredicted RBP7.76□□□□□ -1.17
GYPB-215ENST00000513677 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 ZNF541Q9H0D2 1346 aa7.76□□□□□ -1.17
GYPB-215ENST00000513677 BCORQ6W2J9 1755 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 ARFGEF2Q9Y6D5 1785 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 BTBD11A6QL63 1104 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 KCNQ3O43525 872 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 CAMTA2O94983 1202 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 MYCP01106 439 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 IL6STP40189 918 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 CCDC93Q567U6 631 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 SOGA3Q5TF21 947 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 MAP1SQ66K74 1059 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 TEX13AQ9BXU3 409 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 ZNF395Q9H8N7 513 aaPredicted RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 ABT1Q9ULW3 272 aaKnown RBP7.75□□□□□ -1.17
GYPB-215ENST00000513677 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 LTBP3Q9NS15 1303 aa7.75□□□□□ -1.17
GYPB-215ENST00000513677 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
GYPB-215ENST00000513677 SCN4AP35499 1836 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 PRAMEF22A3QJZ6 481 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 ATP5J2-PTCD1G3V325 749 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
GYPB-215ENST00000513677 EPHX2P34913 555 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 FKBP4Q02790 459 aaKnown RBP eCLIP7.74□□□□□ -1.17
GYPB-215ENST00000513677 MAP7D1Q3KQU3 841 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 KDF1Q8NAX2 398 aaPredicted RBP7.74□□□□□ -1.17
GYPB-215ENST00000513677 GAS2L2Q8NHY3 880 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 HACL1Q9UJ83 578 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 USP16Q9Y5T5 823 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms