RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 DNAJC2Q99543 621 aaKnown RBP20.07■□□□□ 0.8
HMGCL-209ENST00000513148 MYOZ2Q9NPC6 264 aa20.07■□□□□ 0.8
HMGCL-209ENST00000513148 MYO5AQ9Y4I1 1855 aaKnown RBP20.06■□□□□ 0.8
HMGCL-209ENST00000513148 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
HMGCL-209ENST00000513148 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
HMGCL-209ENST00000513148 BOLA2Q9H3K6 86 aa20.06■□□□□ 0.8
HMGCL-209ENST00000513148 LDHBP07195 334 aaKnown RBP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 ZGPATQ8N5A5 531 aaKnown RBP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
HMGCL-209ENST00000513148 ECHDC1Q9NTX5 307 aa20.05■□□□□ 0.8
HMGCL-209ENST00000513148 CLEC11AQ9Y240 323 aa20.05■□□□□ 0.8
HMGCL-209ENST00000513148 CYP2E1P05181 493 aaPredicted RBP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 PNMA8AQ86V59 439 aaPredicted RBP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 RTN4Q9NQC3 1192 aaKnown RBP20.05■□□□□ 0.8
HMGCL-209ENST00000513148 PCDHAC2Q9Y5I4 1007 aa20.05■□□□□ 0.8
HMGCL-209ENST00000513148 ZBTB22O15209 634 aa20.04■□□□□ 0.8
HMGCL-209ENST00000513148 MX1P20591 662 aa20.04■□□□□ 0.8
HMGCL-209ENST00000513148 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
HMGCL-209ENST00000513148 USP50Q70EL3 339 aaPredicted RBP20.04■□□□□ 0.8
HMGCL-209ENST00000513148 ATP5JP18859 108 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 DZIP1Q86YF9 867 aaKnown RBP20.03■□□□□ 0.8
HMGCL-209ENST00000513148 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 LRP2BPQ9P2M1 347 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 PDE4AP27815 886 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 CFAP100Q494V2 611 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 EDC3Q96F86 508 aaKnown RBP20.03■□□□□ 0.8
HMGCL-209ENST00000513148 PIH1D3Q9NQM4 214 aaKnown RBP20.03■□□□□ 0.8
HMGCL-209ENST00000513148 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 SUGT1Q9Y2Z0 365 aa20.03■□□□□ 0.8
HMGCL-209ENST00000513148 MAST3O60307 1309 aa20.02■□□□□ 0.8
HMGCL-209ENST00000513148 ASTN2O75129 1339 aaPredicted RBP20.02■□□□□ 0.8
HMGCL-209ENST00000513148 GOLIM4O00461 696 aa20.02■□□□□ 0.8
HMGCL-209ENST00000513148 CRKP46108 304 aa20.02■□□□□ 0.8
HMGCL-209ENST00000513148 DLGAP5Q15398 846 aa20.02■□□□□ 0.8
HMGCL-209ENST00000513148 DIXDC1Q155Q3 683 aa20.02■□□□□ 0.8
HMGCL-209ENST00000513148 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.79
HMGCL-209ENST00000513148 SPTY2D1Q68D10 685 aaPredicted RBP20.02■□□□□ 0.79
HMGCL-209ENST00000513148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.02■□□□□ 0.79
HMGCL-209ENST00000513148 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.02■□□□□ 0.79
HMGCL-209ENST00000513148 MYH2Q9UKX2 1941 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 SALL3Q9BXA9 1300 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 DOCK2Q92608 1830 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 WNT10BO00744 389 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 LDHDQ86WU2 507 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 TEKT1Q969V4 418 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 MAST2Q6P0Q8 1798 aa20.01■□□□□ 0.79
HMGCL-209ENST00000513148 IDH1O75874 414 aaKnown RBP20■□□□□ 0.79
HMGCL-209ENST00000513148 MECOMQ03112 1051 aa20■□□□□ 0.79
HMGCL-209ENST00000513148 CENPQQ7L2Z9 268 aaPredicted RBP20■□□□□ 0.79
HMGCL-209ENST00000513148 HAUS7Q99871 368 aa20■□□□□ 0.79
HMGCL-209ENST00000513148 TOMM70O94826 608 aa20■□□□□ 0.79
HMGCL-209ENST00000513148 MAP4K4O95819 1239 aaPredicted RBP20■□□□□ 0.79
HMGCL-209ENST00000513148 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
HMGCL-209ENST00000513148 PAG1Q9NWQ8 432 aa20■□□□□ 0.79
HMGCL-209ENST00000513148 GGA3Q9NZ52 723 aa20■□□□□ 0.79
HMGCL-209ENST00000513148 ECM29Q5VYK3 1845 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 ERC2O15083 957 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 MMP14P50281 582 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 PDE1AP54750 535 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 PI4K2BQ8TCG2 481 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
HMGCL-209ENST00000513148 AOX1Q06278 1338 aa19.99■□□□□ 0.79
HMGCL-209ENST00000513148 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
HMGCL-209ENST00000513148 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
HMGCL-209ENST00000513148 PRMT6Q96LA8 375 aaPredicted RBP19.98■□□□□ 0.79
HMGCL-209ENST00000513148 TTF1Q15361 905 aaPredicted RBP19.98■□□□□ 0.79
HMGCL-209ENST00000513148 ANGEL2Q5VTE6 544 aaKnown RBP19.98■□□□□ 0.79
HMGCL-209ENST00000513148 ZNF384Q8TF68 577 aa19.98■□□□□ 0.79
HMGCL-209ENST00000513148 NSUN4Q96CB9 384 aaKnown RBP19.98■□□□□ 0.79
HMGCL-209ENST00000513148 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
HMGCL-209ENST00000513148 GLRX3O76003 335 aaKnown RBP19.97■□□□□ 0.79
HMGCL-209ENST00000513148 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
HMGCL-209ENST00000513148 CHADLQ6NUI6 762 aa19.97■□□□□ 0.79
HMGCL-209ENST00000513148 DAGLAQ9Y4D2 1042 aa19.97■□□□□ 0.79
HMGCL-209ENST00000513148 POLR2AP24928 1970 aaKnown RBP19.97■□□□□ 0.79
HMGCL-209ENST00000513148 PLEKHM2Q8IWE5 1019 aa19.97■□□□□ 0.79
HMGCL-209ENST00000513148 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
HMGCL-209ENST00000513148 ZBED3Q96IU2 234 aaPredicted RBP19.97■□□□□ 0.79
HMGCL-209ENST00000513148 MYO1BO43795 1136 aa19.96■□□□□ 0.79
HMGCL-209ENST00000513148 NAA16Q6N069 864 aaPredicted RBP19.96■□□□□ 0.79
HMGCL-209ENST00000513148 HHIPL2Q6UWX4 724 aa19.96■□□□□ 0.79
HMGCL-209ENST00000513148 SMC1BQ8NDV3 1235 aa19.96■□□□□ 0.79
HMGCL-209ENST00000513148 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
HMGCL-209ENST00000513148 ZDHHC15Q96MV8 337 aa19.96■□□□□ 0.79
HMGCL-209ENST00000513148 TDRD3Q9H7E2 651 aaKnown RBP19.96■□□□□ 0.79
HMGCL-209ENST00000513148 STAP2Q9UGK3 403 aa19.96■□□□□ 0.79
HMGCL-209ENST00000513148 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 ZC3H15Q8WU90 426 aaKnown RBP19.95■□□□□ 0.78
HMGCL-209ENST00000513148 DCPSQ96C86 337 aaKnown RBP19.95■□□□□ 0.78
HMGCL-209ENST00000513148 VEZTQ9HBM0 779 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 GSTO1P78417 241 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 SLF2Q8IX21 1173 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 MAGEB6Q8N7X4 407 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 MYH7P12883 1935 aa19.95■□□□□ 0.78
HMGCL-209ENST00000513148 MROH7-TTC4A0A0A0MT08 1334 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms