RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 IGF2BP3O00425 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLCN3-207ENST00000511092 CXCL9Q07325 125 aa8.73□□□□□ -1.01
CLCN3-207ENST00000511092 CRHR2Q13324 411 aa8.73□□□□□ -1.01
CLCN3-207ENST00000511092 TBC1D9BQ66K14 1250 aa8.73□□□□□ -1.01
CLCN3-207ENST00000511092 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
CLCN3-207ENST00000511092 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
CLCN3-207ENST00000511092 DDX60LQ5H9U9 1706 aaKnown RBP8.73□□□□□ -1.01
CLCN3-207ENST00000511092 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
CLCN3-207ENST00000511092 MED19A0JLT2 244 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-207ENST00000511092 LCE2BO14633 110 aa8.72□□□□□ -1.01
CLCN3-207ENST00000511092 HOXC9P31274 260 aa8.72□□□□□ -1.01
CLCN3-207ENST00000511092 SLC19A1P41440 591 aa8.72□□□□□ -1.01
CLCN3-207ENST00000511092 USP46P62068 366 aa8.72□□□□□ -1.01
CLCN3-207ENST00000511092 MRPS5P82675 430 aaKnown RBP8.72□□□□□ -1.01
CLCN3-207ENST00000511092 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-207ENST00000511092 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
CLCN3-207ENST00000511092 PSMD1Q99460 953 aa8.72□□□□□ -1.01
CLCN3-207ENST00000511092 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-207ENST00000511092 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.01
CLCN3-207ENST00000511092 FBLN1P23142 703 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 SP3Q02447 781 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 Q3C1V9 767 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 ERMP1Q7Z2K6 904 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 NIM1KQ8IY84 436 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 DIS3LQ8TF46 1054 aaKnown RBP8.71□□□□□ -1.02
CLCN3-207ENST00000511092 THAP11Q96EK4 314 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 RIC1Q4ADV7 1423 aa8.71□□□□□ -1.02
CLCN3-207ENST00000511092 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
CLCN3-207ENST00000511092 GJB1P08034 283 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 CCL5P13501 91 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
CLCN3-207ENST00000511092 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 BCL2L13Q9BXK5 485 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 ARHGAP39Q9C0H5 1083 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 CNOT7Q9UIV1 285 aaKnown RBP8.7□□□□□ -1.02
CLCN3-207ENST00000511092 LTBP2Q14767 1821 aa8.7□□□□□ -1.02
CLCN3-207ENST00000511092 KTN1Q86UP2 1357 aaKnown RBP8.7□□□□□ -1.02
CLCN3-207ENST00000511092 HOXA2O43364 376 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PRR20EP86478 221 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PRR20CP86479 221 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PRR20DP86480 221 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PRR20BP86481 221 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PRR20AP86496 221 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 U2AF1L4Q8WU68 220 aaKnown RBP8.69□□□□□ -1.02
CLCN3-207ENST00000511092 HLA-CQ95604 372 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 SCAF8Q9UPN6 1271 aaKnown RBP8.69□□□□□ -1.02
CLCN3-207ENST00000511092 KIF24Q5T7B8 1368 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 TONSLQ96HA7 1378 aa8.69□□□□□ -1.02
CLCN3-207ENST00000511092 PLXNA3P51805 1871 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 CYSRT1A8MQ03 144 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 RAD17O75943 681 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 BMP1P13497 986 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 PDE4DQ08499 809 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 AOC3Q16853 763 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 RNF19BQ6ZMZ0 732 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 PARP9Q8IXQ6 854 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
CLCN3-207ENST00000511092 UIMC1Q96RL1 719 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 CDHR2Q9BYE9 1310 aa8.68□□□□□ -1.02
CLCN3-207ENST00000511092 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-207ENST00000511092 KCNQ1P51787 676 aa8.67□□□□□ -1.02
CLCN3-207ENST00000511092 GUCA2AQ02747 115 aa8.67□□□□□ -1.02
CLCN3-207ENST00000511092 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
CLCN3-207ENST00000511092 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-207ENST00000511092 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
CLCN3-207ENST00000511092 PAWRQ96IZ0 340 aaKnown RBP8.67□□□□□ -1.02
CLCN3-207ENST00000511092 RNF208Q9H0X6 261 aa8.67□□□□□ -1.02
CLCN3-207ENST00000511092 RIF1Q5UIP0 2472 aaKnown RBP8.66□□□□□ -1.02
CLCN3-207ENST00000511092 FAM186AA6NE01 2351 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 PPIP5K2O43314 1243 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 NPR1P16066 1061 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 TFF2Q03403 129 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 ZBTB1Q9Y2K1 713 aa8.66□□□□□ -1.02
CLCN3-207ENST00000511092 DNAH14Q0VDD8 3507 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 PRR33A8MZF0 331 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 PRAMEF18Q5VWM3 479 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 SPIRE2Q8WWL2 714 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
CLCN3-207ENST00000511092 MYO15AQ9UKN7 3530 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 H7C1D1 291 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 MS4A1P11836 297 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 FKBP1BP68106 108 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-207ENST00000511092 DNAJC10Q8IXB1 793 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
CLCN3-207ENST00000511092 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
CLCN3-207ENST00000511092 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms