RNA–Protein interactions for RNA: ENST00000509665.1

SEMA6A-208, Transcript of semaphorin 6A, human

TSL 4

Gene SEMA6A, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA6A-208	ENST00000509665	DZIP1L	Q8IYY4	767 aa	Known RBP	10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	ARHGAP45	Q92619	1136 aa		10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	CFHR5	Q9BXR6	569 aa		10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	VEZT	Q9HBM0	779 aa		10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	ZNF70	Q9UC06	446 aa	Predicted RBP	10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	HDAC5	Q9UQL6	1122 aa		10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	SUGT1	Q9Y2Z0	365 aa		10.84	□□□□□ -0.67
SEMA6A-208	ENST00000509665	ZBTB22	O15209	634 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PPP1R12B	O60237	982 aa	Predicted RBP	10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ABCB7	O75027	752 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ZBTB48	P10074	688 aa	Predicted RBP	10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	SLC5A1	P13866	664 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	BCAM	P50895	628 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	RBM5	P52756	815 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PRKG1	Q13976	671 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	RASA3	Q14644	834 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	GRIK5	Q16478	980 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	LPIN2	Q92539	896 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TEPSIN	Q96N21	525 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MRI	Q9BWK5	157 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MAST3	O60307	1309 aa		10.83	□□□□□ -0.68
SEMA6A-208	ENST00000509665	LAMB1	P07942	1786 aa		10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	RGS19	P49795	217 aa		10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CHAF1A	Q13111	956 aa	Predicted RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	INTS3	Q68E01	1043 aa	Known RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CTU1	Q7Z7A3	348 aa	Known RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	WNK4	Q96J92	1243 aa		10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ZDHHC15	Q96MV8	337 aa		10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TDRD3	Q9H7E2	651 aa	Known RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	FZD1	Q9UP38	647 aa		10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	LRRFIP2	Q9Y608	721 aa	Known RBP	10.82	□□□□□ -0.68
SEMA6A-208	ENST00000509665	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MANSC4	A6NHS7	340 aa	Predicted RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CCDC85C	A6NKD9	419 aa		10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	FRAT2	O75474	233 aa	Predicted RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	USP2	O75604	605 aa	Predicted RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IREB2	P48200	963 aa	Known RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MKRN3	Q13064	507 aa	Known RBP	10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TEKT1	Q969V4	418 aa		10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CLMN	Q96JQ2	1002 aa		10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MEIS3	Q99687	375 aa		10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	COPRS	Q9NQ92	184 aa		10.81	□□□□□ -0.68
SEMA6A-208	ENST00000509665	GPR25	O00155	361 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TBC1D8	O95759	1140 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ALDH1A1	P00352	501 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IL15	P40933	162 aa	Predicted RBP	10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TNNI2	P48788	182 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	INHBE	P58166	350 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	MTX1	Q13505	466 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ATP2B3	Q16720	1220 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	FKBP1C	Q5VVH2	108 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	HHIPL2	Q6UWX4	724 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CDAN1	Q8IWY9	1227 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ANKRD13A	Q8IZ07	590 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	WDR66	Q8TBY9	1149 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	SLC10A4	Q96EP9	437 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	CEP126	Q9P2H0	1117 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	SALL1	Q9NSC2	1324 aa		10.8	□□□□□ -0.68
SEMA6A-208	ENST00000509665	OTOF	Q9HC10	1997 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TCP10L2	B9ZVM9	353 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	SEMA3E	O15041	775 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	GNAI3	P08754	354 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TRIM27	P14373	513 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	GJA5	P36382	358 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PKN2	Q16513	984 aa	Known RBP	10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	FAM83A	Q86UY5	434 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IFNL1	Q8IU54	200 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TMEM39B	Q9GZU3	492 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	SIL1	Q9H173	461 aa		10.79	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TESPA1	A2RU30	521 aa	Predicted RBP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IPO8	O15397	1037 aa	Known RBP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	ATF7IP	Q6VMQ6	1270 aa		10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	TMOD2	Q9NZR1	351 aa		10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PA2G4	Q9UQ80	394 aa	Known RBP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	PDS5A	Q29RF7	1337 aa	Known RBP	10.78	□□□□□ -0.68
SEMA6A-208	ENST00000509665	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	PHKA1	P46020	1223 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	CACNB3	P54284	484 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	VGLL4	Q14135	290 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	R3HDML	Q9H3Y0	253 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	GNL3L	Q9NVN8	582 aa	Known RBP	10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	DENND2A	Q9ULE3	1009 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	DAGLA	Q9Y4D2	1042 aa		10.77	□□□□□ -0.69
SEMA6A-208	ENST00000509665	SRGAP3	O43295	1099 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	FKTN	O75072	461 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	BCAR3	O75815	825 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	PRDX5	P30044	214 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	ADORA1	P30542	326 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	MAP3K9	P80192	1104 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	OPTN	Q96CV9	577 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	HOOK2	Q96ED9	719 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	MS4A4A	Q96JQ5	239 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	ELP3	Q9H9T3	547 aa		10.76	□□□□□ -0.69
SEMA6A-208	ENST00000509665	RFX7	Q2KHR2	1363 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms