RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
CLGN-203ENST00000509477 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
CLGN-203ENST00000509477 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
CLGN-203ENST00000509477 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
CLGN-203ENST00000509477 PDE4DIPQ5VU43 2346 aa8.48□□□□□ -1.05
CLGN-203ENST00000509477 EIF4A2Q14240 407 aaKnown RBP8.47□□□□□ -1.05
CLGN-203ENST00000509477 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
CLGN-203ENST00000509477 EMID1Q96A84 441 aaPredicted RBP8.47□□□□□ -1.05
CLGN-203ENST00000509477 PBXIP1Q96AQ6 731 aa8.47□□□□□ -1.05
CLGN-203ENST00000509477 SAGE1Q9NXZ1 904 aa8.47□□□□□ -1.05
CLGN-203ENST00000509477 HDAC9Q9UKV0 1011 aa8.47□□□□□ -1.05
CLGN-203ENST00000509477 ARFGEF2Q9Y6D5 1785 aa8.47□□□□□ -1.05
CLGN-203ENST00000509477 STARD3NLO95772 234 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 NPR1P16066 1061 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 VARSP26640 1264 aaKnown RBP8.46□□□□□ -1.06
CLGN-203ENST00000509477 SCNN1DP51172 638 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 HUNKP57058 714 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 SLC39A6Q13433 755 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 OLFM4Q6UX06 510 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
CLGN-203ENST00000509477 GLIS2Q9BZE0 524 aaPredicted RBP8.46□□□□□ -1.06
CLGN-203ENST00000509477 ADARB2Q9NS39 739 aaKnown RBP8.46□□□□□ -1.06
CLGN-203ENST00000509477 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
CLGN-203ENST00000509477 TNNT2P45379 298 aaPredicted RBP8.45□□□□□ -1.06
CLGN-203ENST00000509477 FXR1P51114 621 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLGN-203ENST00000509477 NBPF5PQ86XG9 351 aaPredicted RBP8.45□□□□□ -1.06
CLGN-203ENST00000509477 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
CLGN-203ENST00000509477 SLC17A8Q8NDX2 589 aa8.45□□□□□ -1.06
CLGN-203ENST00000509477 RNF186Q9NXI6 227 aa8.45□□□□□ -1.06
CLGN-203ENST00000509477 CEP126Q9P2H0 1117 aa8.45□□□□□ -1.06
CLGN-203ENST00000509477 KIF23Q02241 960 aaPredicted RBP8.44□□□□□ -1.06
CLGN-203ENST00000509477 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
CLGN-203ENST00000509477 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 RGMBQ6NW40 437 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 C7orf43Q8WVR3 580 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
CLGN-203ENST00000509477 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 ZNF157P51786 506 aaPredicted RBP8.43□□□□□ -1.06
CLGN-203ENST00000509477 EIF5P55010 431 aaKnown RBP8.43□□□□□ -1.06
CLGN-203ENST00000509477 CDC37L1Q7L3B6 337 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 NIM1KQ8IY84 436 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 C1QTNF2Q9BXJ5 285 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 POLKQ9UBT6 870 aa8.43□□□□□ -1.06
CLGN-203ENST00000509477 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CLGN-203ENST00000509477 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
CLGN-203ENST00000509477 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
CLGN-203ENST00000509477 C2orf69Q8N8R5 385 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
CLGN-203ENST00000509477 TESK2Q96S53 571 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 PSMD1Q99460 953 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 BCL2L13Q9BXK5 485 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 GPRC5DQ9NZD1 345 aa8.42□□□□□ -1.06
CLGN-203ENST00000509477 IGSF3O75054 1194 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 CDCA8Q53HL2 280 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 TPTE2Q6XPS3 522 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 PPP1R12CQ9BZL4 782 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
CLGN-203ENST00000509477 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
CLGN-203ENST00000509477 CDV3Q9UKY7 258 aaKnown RBP8.41□□□□□ -1.06
CLGN-203ENST00000509477 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
CLGN-203ENST00000509477 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 WNT7AO00755 349 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 PPIP5K2O43314 1243 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.06
CLGN-203ENST00000509477 FOXC1Q12948 553 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 UCN2Q96RP3 112 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 LGR6Q9HBX8 967 aa8.4□□□□□ -1.06
CLGN-203ENST00000509477 GBA2Q9HCG7 927 aaPredicted RBP8.4□□□□□ -1.06
CLGN-203ENST00000509477 PALM3A6NDB9 673 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 FAM155AB1AL88 458 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 GMPSP49915 693 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
CLGN-203ENST00000509477 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
CLGN-203ENST00000509477 FBXO46Q6PJ61 603 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 RNF135Q8IUD6 432 aa8.39□□□□□ -1.07
CLGN-203ENST00000509477 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
CLGN-203ENST00000509477 TEX13AQ9BXU3 409 aaPredicted RBP8.39□□□□□ -1.07
CLGN-203ENST00000509477 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
CLGN-203ENST00000509477 H7C1D1 291 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
CLGN-203ENST00000509477 CAMTA2O94983 1202 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 SKIP12755 728 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
CLGN-203ENST00000509477 TBC1D9Q6ZT07 1266 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms