RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 RGS19P49795 217 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 CACNB3P54284 484 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 DLGAP5Q15398 846 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 PI16Q6UXB8 463 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
SNCA-211ENST00000508895 AK9Q5TCS8 1911 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
SNCA-211ENST00000508895 PRDX5P30044 214 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
SNCA-211ENST00000508895 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
SNCA-211ENST00000508895 RASAL3Q86YV0 1011 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 SSH3Q8TE77 659 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
SNCA-211ENST00000508895 DDX19BQ9UMR2 479 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 DOCK2Q92608 1830 aa10.76□□□□□ -0.69
SNCA-211ENST00000508895 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 LBX1P52954 281 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 CAVIN4Q5BKX8 364 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 APOBEC3HQ6NTF7 200 aaKnown RBP10.75□□□□□ -0.69
SNCA-211ENST00000508895 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 VPS37DQ86XT2 251 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 SIRT2Q8IXJ6 389 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 C2orf69Q8N8R5 385 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 CLMNQ96JQ2 1002 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 TEPSINQ96N21 525 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
SNCA-211ENST00000508895 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 SLC10A3P09131 477 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 ZNF157P51786 506 aaPredicted RBP10.74□□□□□ -0.69
SNCA-211ENST00000508895 RBM5P52756 815 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNCA-211ENST00000508895 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
SNCA-211ENST00000508895 RASA3Q14644 834 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 CEP85Q6P2H3 762 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 ZBTB40Q9NUA8 1239 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
SNCA-211ENST00000508895 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
SNCA-211ENST00000508895 FRAT2O75474 233 aaPredicted RBP10.73□□□□□ -0.69
SNCA-211ENST00000508895 GJA5P36382 358 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
SNCA-211ENST00000508895 TBC1D9Q6ZT07 1266 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
SNCA-211ENST00000508895 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
SNCA-211ENST00000508895 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
SNCA-211ENST00000508895 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
SNCA-211ENST00000508895 CCDC85CA6NKD9 419 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 USP2O75604 605 aaPredicted RBP10.72□□□□□ -0.69
SNCA-211ENST00000508895 MAP2K2P36507 400 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 ECE1P42892 770 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
SNCA-211ENST00000508895 NFIAQ12857 509 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 ZFPM1Q8IX07 1006 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 HMG20BQ9P0W2 317 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
SNCA-211ENST00000508895 HDAC5Q9UQL6 1122 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 DAGLAQ9Y4D2 1042 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 LAMB1P07942 1786 aa10.72□□□□□ -0.69
SNCA-211ENST00000508895 MCAMP43121 646 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 ZDHHC15Q96MV8 337 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 NEUROD6Q96NK8 337 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 R3HDMLQ9H3Y0 253 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 EXOC6BQ9Y2D4 811 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 NOP58Q9Y2X3 529 aaKnown RBP10.71□□□□□ -0.69
SNCA-211ENST00000508895 NDUFB9Q9Y6M9 179 aa10.71□□□□□ -0.69
SNCA-211ENST00000508895 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 SURF6O75683 361 aaKnown RBP10.7□□□□□ -0.7
SNCA-211ENST00000508895 MMP14P50281 582 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
SNCA-211ENST00000508895 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNCA-211ENST00000508895 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
SNCA-211ENST00000508895 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 WDR66Q8TBY9 1149 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 TBC1D22AQ8WUA7 517 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 EAF2Q96CJ1 260 aaPredicted RBP10.7□□□□□ -0.7
SNCA-211ENST00000508895 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SNCA-211ENST00000508895 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
SNCA-211ENST00000508895 DBNLQ9UJU6 430 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms