RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 MRPL50Q8N5N7 158 aaKnown RBP8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 MTMR14Q8NCE2 650 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 SUCLG2Q96I99 432 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 PRMT6Q96LA8 375 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 R3HDMLQ9H3Y0 253 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 JAG2Q9Y219 1238 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 UTYO14607 1347 aa8.17□□□□□ -1.1
HMGN1P16-201ENST00000508308 MKI67P46013 3256 aaKnown RBP8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 PLIN1O60240 522 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 TM4SF4P48230 202 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 PRKG1Q13976 671 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 GRIK5Q16478 980 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 LDHAL6AQ6ZMR3 332 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 FAM205AQ6ZU69 1335 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 APOBEC3FQ8IUX4 373 aaKnown RBP8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 FAM84BQ96KN1 310 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 DEFB129Q9H1M3 183 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 RIPOR2Q9Y4F9 1068 aa8.16□□□□□ -1.1
HMGN1P16-201ENST00000508308 LAMB1P07942 1786 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 F8W031 263 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 TBC1D8O95759 1140 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 GYG1P46976 350 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 FKBP1AP62942 108 aaKnown RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 MKRN3Q13064 507 aaKnown RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 DLGAP5Q15398 846 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 MAP3K11Q16584 847 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 CCDC57Q2TAC2 916 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 RABL6Q3YEC7 729 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 ZNF804AQ7Z570 1209 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 IFNL1Q8IU54 200 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 C9orf78Q9NZ63 289 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 BRCA2P51587 3418 aa8.15□□□□□ -1.1
HMGN1P16-201ENST00000508308 COL1A1P02452 1464 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 UBE4AQ14139 1066 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 LRRC24Q50LG9 513 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 NBPF12Q5TAG4 269 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 FBXO33Q7Z6M2 555 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 VGLL2Q8N8G2 317 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 ZNF296Q8WUU4 475 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 USP44Q9H0E7 712 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 CNNM1Q9NRU3 951 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 ARAP2Q8WZ64 1704 aa8.14□□□□□ -1.11
HMGN1P16-201ENST00000508308 OTOFQ9HC10 1997 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 HOXB1P14653 301 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 NF2P35240 595 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 GJA5P36382 358 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 SLFN5Q08AF3 891 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 ARMC9Q7Z3E5 817 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 CTU1Q7Z7A3 348 aaKnown RBP8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 KLHDC4Q8TBB5 520 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 CDCA7LQ96GN5 454 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 TEPSINQ96N21 525 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
HMGN1P16-201ENST00000508308 GPR25O00155 361 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 IGF2BP3O00425 579 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 SOX10P56693 466 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 RASA3Q14644 834 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 NOM1Q5C9Z4 860 aaKnown RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 TAF7LQ5H9L4 462 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 MFSD14BQ5SR56 506 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 ZNF70Q9UC06 446 aaPredicted RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 HPS5Q9UPZ3 1129 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 PPP2R3BQ9Y5P8 575 aa8.12□□□□□ -1.11
HMGN1P16-201ENST00000508308 PTPRCP08575 1304 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 E9PSI1 815 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 PDE8BO95263 885 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 FGFR2P21802 821 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 BCAMP50895 628 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 CAP1Q01518 475 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 DZIP1LQ8IYY4 767 aaKnown RBP8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 PTPN18Q99952 460 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 VEZTQ9HBM0 779 aa8.11□□□□□ -1.11
HMGN1P16-201ENST00000508308 UNCXA6NJT0 531 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms